Salmo salar (Atlantic salmon): 106580331
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Entry
106580331 CDS
T04363
Name
(RefSeq) AP-1 complex subunit beta-1-like
KO
K12392
AP-1 complex subunit beta-1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
106580331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106580331
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Others
AP-1 complex
106580331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
PDS5
Cnd3
HEAT_GCN1
Arm
RTP1_C1
HEAT_EZ
XMAP215_CLASP_TOG
NELF-A_N
VPS15-like_hel
Arm_2
API5
FANCI_S3
Transposase_22
Motif
Other DBs
NCBI-GeneID:
106580331
NCBI-ProteinID:
XP_014016702
UniProt:
A0A1S3NMP9
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All DBs
Position
ssa20:complement(27040896..27081504)
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AA seq
1024 aa
AA seq
DB search
MEWANQLCENRQFGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDANPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQSINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVMHKRLPARTGSGESTESPDVGTAAGGSAPEAAPSIIPSQGDLLGDLLNLDMAPPTT
SGPPPPTTGMQMGGMDLLGGGLDSLMGDESEPPHVPPRTDTPRSPSPQPPSPVYTHTDYT
YTDYSHTDSPPDHSPTEHSPPAELGGDIGGSPAMGAGFGAAPAVMPASLNAPVGGGLGDL
FDLGGGVGMPMGAYIPPKIVWLPAMKAKGLEISGTFARRAGVIQMELILTNKAMSVMTDF
AIQFNRNSFGLAPAGPLQVLTPLGPNQTIEVSLPLSTVGPVMKMDPLNNLQVAVKNNIDV
FYFSCQYPISMLFVEDGKMERQLFLATWKDIPNDNESQFQIKDCHLNSDAASSKLQGSNI
FTIAKRTVEGQDMLYMSIKLSNGIWVLAELKVQAGNPNYTISLKCRAPEVSQCVFQCYEA
VLKN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggctaatcagctatgcgagaaccggcaatttggatccaagatgacggactct
aagtatttcaccactaccaagaaaggagagatctttgagctgaaagcggagctgaacagc
gataagaaggagaagaagaaggaggctgtgaagaaggtcattgcctccatgaccgttggg
aaggatgtcagtgccttgtttccagatgtggtgaactgcatgcagactgacaacctggag
ctgaagaagctggtctacctgtacctgatgaattatgccaagagccagcctgacatggcc
atcatggctgtcaacaccttcgtcaaggactgtgaggacgctaaccccctgatccgggcc
ctggctgtgcgcactatgggctgcatccgcgtggacaagatcactgagtacctgtgtgag
cctctgaggaagtgtctgaaggacgaggacccctacgtgaggaagactgcagccgtgtgc
gtggccaagctccatgacatcaacgcccagctggtggaggaccagggcttcctggatacc
ctcaaggacctcatctctgactccaaccccatggtggtagcgaatgccgtggcagccctg
tctgagattgcagagtcccaccccaacagcaacctgctggacctcaacccccagtccatc
aacaagctgctgacggccctcaacgagtgcacagagtggggtcagatcttcatcctggac
tgcctggccaactacaccccccgtgacgaccgcgagtcccagagtatctgtgagcgggtg
accccccgtctgtcccatgccaactctgcggtggtgttgtcggcggtcaaggtgctgatg
aagttcatggagatgcttcctaaggacctggactactatggcaccttgctgaagaagctg
gccccgcccctggtcaccctgctgtctgcagagcctgagctgcagtacgtggccctgagg
aacatcaacctcatcgtacagaaacgcccagagatcctgaagcatgagatgaaggtgttc
tttgtgaagtacaacgaccccatctatgtcaagctggagaaactggacatcatgatccgc
ttggcatctcaagccaacatcgcccaggtgctggcagagctgaaggagtatgccactgag
gtggatgtggactttgtgcggaaggcagtccgagccatcggccgctgtgccattaaagtg
gagcaatcagcggagcgctgtgtgagcaccctgctggacctcatccagaccaaggtcaac
tatgtggtgcaggaggccatcgtggtcatcaaggacattttccgcaagtaccccaacaag
tatgagagtgtgattgccacgctgtgtgagaacctggactctctggatgagccggaggcg
cgggcggccatgatctggatcgtaggagagtacgctgagaggattgacaacgctgatgag
ctgctggagagcttcctggagggcttccacgacgagagcacccaggtgcaactgcagctg
ctgacagccatagtgaagctgttcctgaagaaacccactgagacccaggagctggtgcag
caggtgctcagcctggccacacaggactccgacaatccggacctgcgagaccgtggctac
atctactggcgcctgctctccactgaccctgtggctgccaaggaggtggtactggccgag
aagcccctgatctcagaggagaccgacctgattgagcccaccctgctggaggagctcatc
tgccacatcggcacgctggcttctgtctaccataaaccccccagcgccttcgtggagggc
agccgcggtgtgatgcacaagaggctccctgcccgcactggatcaggagagagtacggag
agcccagacgtgggcactgccgctgggggctctgcccctgaggctgctccctctatcatc
ccctcccagggagacctcctgggggaccttctcaacctggacatggcaccccccaccacc
agcggccccccaccccccaccaccggcatgcagatggggggcatggacctcctgggtgga
ggtctggacagcctgatgggggatgagtctgaaccgccccacgttcccccgcggacggac
actcctcgctctccgtcacctcagcccccgtcgccagtgtacacccacactgactacacc
tacactgactacagtcacactgacagccctcctgaccacagccctactgagcacagcccc
cctgcagagcttggaggagatattggtgggagtcctgcaatgggggcaggttttggagcg
gctccagctgtgatgccagcctcgctcaacgccccagtggggggtggcctaggagacctg
tttgacttgggaggtggagttggcatgccgatgggagcatatattcctccaaaaatagtg
tggctcccggccatgaaggctaaaggtctggagatttctgggaccttcgctcggcgtgct
ggagtcatccagatggagctgatcctcaccaacaaggccatgagcgtcatgactgatttc
gccatccagttcaacaggaacagttttggcctggcccctgccggccctctccaggtcctc
acccctctcggcccaaaccagacaattgaagtcagcctccccctcagcactgtcgggcca
gtcatgaagatggaccctctcaacaacctgcaggtggctgtgaagaacaacattgacgtc
ttctacttcagctgccaataccccatcagcatgctgtttgtggaagatggaaagatggag
cgtcagctgttcctggccacatggaaagacattcctaatgacaacgagtctcagttccag
atcaaagactgtcatctcaactcagatgcagccagcagcaagctgcagggcagtaacatc
ttcaccatagccaagcgcacggtggagggccaggatatgctttacatgtccatcaaactg
tccaatgggatctgggtgctggctgaactgaaggtgcaggctggaaaccccaactacacg
atctctctgaagtgcagagccccagaggtgtcccagtgtgtgttccagtgctacgaggca
gtgctgaagaactga
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integrated database retrieval system