Salmo salar (Atlantic salmon): 106580343
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Entry
106580343 CDS
T04363
Name
(RefSeq) transcription factor COE2-like
KO
K09103
early B-cell factor
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106580343
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106580343
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
106580343
NCBI-ProteinID:
XP_014016748
UniProt:
A0A1S3NMU8
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Position
ssa20:26588982..26622977
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AA seq
582 aa
AA seq
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MYGIQEHLIRDVSGLKERTLGEEMDPVRSWVRNVGVVDANVAAQSGVSLSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVEVERTSFVDFVEHDKEQTGEKTNNGTHYKLQLLYSNGV
RTEQDLYARLIDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLEPGESVENGMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPDKLAKEMLLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHSQ
LQALPSSPAHGSVMGLGSYPSQLGVSISEPGQTSQGYIRNSSSLSPRGYPSASTPQQSGY
GGGGGMSGGYGAVPMTSLGVPGSPGFSSASPTGSPYGIMPSSPTIPGSSSSSLLPFSSFP
SSAKQKSAFAPVLRPQGSSSPACPASGGNSFRAMTGLVVPPM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggatccaggagcatctgataagagacgtcagcggattaaaagaaagaactctg
ggagaggagatggatccggtccggtcctgggtgcgtaatgtcggtgttgtcgatgctaac
gtagcggcgcaaagtggtgtatctctctccagggcccactttgagaagcagcccccctct
aacctgcgcaagtccaacttcttccattttgtcctggcactctatgacagacacggacag
cctgtagaggtggagaggacttcctttgtggactttgtggagcacgacaaggagcagacg
ggagaaaaaaccaacaacggcacgcactacaagctgcagctcctctacagcaatggggtt
cgtacagaacaggatctttatgcacgacttattgactccgtcactaaacagcccatatca
tatgagggacagaacaagaatcctgaaatgtgccgggttttgctcactcacgaggttatg
tgcagtcgctgttgtgagaagaaaagctgtggaaaccgcaatgagacgccctctgacccg
gtcatcattgacaggttcttcttgaagtttttcttgaagtgtaaccagaattgtctgaag
acagcaggaaacccaagggacatgaggagatttcaggtggtcctgtccagcactgtgagt
gtagacggccatgtcttagccgtgtctgacaacatgtttgtccacaataactccaaacat
ggccggagagctcgcaggctagagcctggagagtcagtggagaacggtatggagtatgcc
accccctgtatcaaagccatcagccccagtgagggctggaccacaggcggggccatggtc
atcgtgatcggggagaacttctttgacgggctgcaggtggtgttcggcagcatgctggtg
tggagcgagttgatcacgccccacgccatccgtgtccagacgcccccacgccacatccca
ggggtcgtggaggtcacgctgtcctacaaatctaaacagttctgcaagggggcacctgga
cgcttcatctatacagcgctgaatgagcccaccatagactacggtttccagaggcttcaa
aaggtcattcccagacaccctggtgaccctgacaaactagctaaggagatgctactgaag
agagcagctgatctggtagaagccttgtatggaaacccacacagtaatcaggatatgttg
ctgaagcgtgcagcggacatcgctgaggccctgtacagtgttccccgtccccacagccag
ctgcaggccctgcccagctccccagcccacggcagtgtcatgggcctgggctcatacccc
tcccagctgggggtcagcatcagcgagccaggacaaaccagccaaggttatattcgtaac
tccagcagtttgtccccccgggggtacccctctgcctccacccctcagcagtcgggctat
gggggtggtggaggcatgagtggggggtacggggcagtgcccatgactagtctaggggtg
ccagggtcccctggtttcagcagtgcctcccccactggttctccctatggcataatgcca
tctagtcccactatcccgggttccagctcctcctccctcctgccgttctcctccttcccg
tcctcagccaaacagaagagtgccttcgctcctgtcctccggccccagggctcctcctct
cctgcctgtcccgcttcaggaggcaacagcttcagagcgatgaccggcctggtagttccc
ccgatgtag
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