Salmo salar (Atlantic salmon): 106580344
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Entry
106580344 CDS
T04363
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106580344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106580344
Spliceosome [BR:
sasa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
106580344
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
106580344
NCBI-ProteinID:
XP_014016752
UniProt:
A0A1S3NMU9
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Position
ssa20:26531157..26535700
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AA seq
494 aa
AA seq
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MVSVKREREIDLEDDEVPVKIGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSHIN
VYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYV
LKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLRNY
FLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQ
ITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEKVAL
LLKEEYQEEMSDTTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYKTY
KENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQVTEK
NTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWK
RRESEDDTTNHTGA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgtaaaacgggagcgagaaattgacttggaagacgatgaagtacctgtgaaa
attggccgttcgtccgaggaccgcagaagtcgccattgtccctacctcgacacaatcaat
aggagtgtactggacttcgattttgagaagctatgctccatttccctctcccacatcaat
gtatatgcctgtctcatttgtgggaaatacttccaaggtagaggtctgaagtcccatgcc
tacactcacagtgtgcagttcacccaccatgtgttcctcaatctgcacaccctcaagttc
tactgtctgccagataactacgagatcattgactcatcgttggaagacatcacgtatgta
ctgaagcccacgttcaccagacagcacatctctggattggataagcagggaaagctgtat
cgagcctatgatggcaccacctatctgcctggcatcgtagggctcaacaacatcaaggct
aatgactacgctaatgtggtgctgcaggccctgtccaatgtgcccccactgcggaactac
tttttggaagaggagaattactgcggcatccgtaggccgccgggtgacatcatgttcctg
ctcgtgcagcgattcggtgagctgatgcgcaagctgtggaacccacggaacttcaaggcc
catgtgtcaccccacgagatgttgcaggccgtagtgctgtgcagcaagaagaacttccag
atcaccaagcaaggggatgctgtggacttcctgtcatggttcatgaacgctctgcatggc
gcactgggaggaaccaagaagaaaccctcaagccttaccaaagtgttccagggttccatg
cgtatcttctccaagaagcttcctcacccagatttgccaccagaagagaaggtggctctg
cttctgaaggaggagtaccaggaggagatgtctgacaccaccttcctcttcttgaccctt
gacctccccacagccccgctgtacaaggatgagaaggagcagctcatcatcccacaggtc
cccctcttcaacatcctggccaagttcaatggcaacacagagaaggagtataaaacatac
aaagagaatttcctgaagaggttccagttgctcaagctgcccccctatctcatcttctgc
attaagaggttcaccaagaacaacttctttgtggagaagaaccccaccattgtcaacttc
cccatcacgaacgtagaccttcgtgagtacctgacagaggaagcacaggtcacagaaaag
aacacaacctatgacctggtagccaatgtggtgcatgatgggaagcccactgagggggca
tacagaatacatgtcctgcatcatggcactgggaagtggtacgagctacaggacctgcag
gtgacagatatcctgccccagatgatcacactgtcagaggcctacattcagatttggaaa
agaagagagagcgaagatgacacgactaaccacactggggcgtga
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