Salmo salar (Atlantic salmon): 106580364
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Entry
106580364 CDS
T04363
Name
(RefSeq) CAP-Gly domain-containing linker protein 1-like
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
106580364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106580364
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
106580364
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
106580364
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
106580364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
106580364
NCBI-ProteinID:
XP_014016791
UniProt:
A0A1S3NNL3
LinkDB
All DBs
Position
ssa20:complement(25997638..26056047)
Genome browser
AA seq
2317 aa
AA seq
DB search
MSTTKPSGLKAPSKMGRSTGAPATKITPSAAGSKVAAADKSTPGGGAAGTQDGGENFQVG
ERVWVNGNKPGVVQFLGEAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALKGIFTRP
SKLSYTEGEANGTQTAPPSRAGSPTPSTASLASHTPSVKKASTATPATSATPASNLARTN
SESISNLSDTSSVKKGERELKNGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGK
NDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTARKLVATPSGLKRSPSAS
SISSMSSVASSVSAKPSRTGLLTETSSRYSRKISGTTAVQEVLKEKQQHIEQLMAERDME
RAEVAKATTHVGEVEQELTLLREDQEQMEAKMDQLRTLVEAADKEKVELLNQLEEEKRKV
EDLQFRVEEACITKGDLETQTKLEHAHIKELEQSLLFEKTKAEKLQRELEDTRVATVSEK
SRIMELERDLVLRTREVADLRLRLEVQQSSEGSDSTTSPLLEEVSSLRAQLASQEDQQRV
ELARLKETLAAAEKAHSEAVSQFQVSSTKISTDNEQLKLRLSQNEKENADIIELWRSKLE
SAIASHQQAMEELKVSFSKGAGSQTTELVETKSALERLKVEHKQALEEVGARCEAEAAAR
ARETGELNKQLLVVLEEKECLEESLRSSVESAEEQHLVEMEDVLGKLHTAELKVNELEEH
EAKLVQQTQDRAKEVQEQMAAMEALQSQAGQGNQALQNLRTQLEEAQSQARSQGNRVSEL
NSELEGKQQELLSLQQSLTSVLQDKVSLEQELGNLKQKLSESTDNQAKSTQTMQELERRL
KAGEERLDQLANEKAKLQSDISDMKSSGDSSAQLTKMNQDITQKERSSLTTSRIFISERG
APPADKLIPSNPRGKRQSSDMGVQIPKRLEELQTQLAEEKERAACSEEQQQQEVAQKEQE
LKGARDEHQGQLSNLQGKITQLEKSLQQGEAQAKDLQTSQQKALSEASEHHAKQLQELQG
QADQTKQELSVSREKAQELERLVAELQPYKEKAQFLSDELDSSGQHIERLSTDLKKQISV
LAHMSKESSHLKAQKGSLKNQLSELEAKLSASETSHQELSGKTEELLTLRDKLTKEQEEL
WTTNRKLDGENASLSREVEKLRVAVEEAQANNKSLSQSEAERQSQIEELQKTNAEKNEVL
LKYQQEILQQETKRKQLAEVYEKTCEERNELQEELKQSREKLTSEKDSLLLERDAARNAK
KSLDAKNVELQARCQSLSLEKEDFYLKNTQLQAQTETLGKDKVEMFTQINAAIFDKEALQ
ALNAELQNQLNITKKDLEKSVHDKVELHASKMSLAKMLDQSKTSSEVTDSERLHLLQEKE
DLLATQRKVCSEKDELIKEREELKEKLRLSTEEVATSKEKVKELLSSFGEEKEALCLQNA
ETEKALHSIRKEKMAIELTLEKQNMESDRLVHEKEELEEKHTKEISEKCTLTKERDKLAG
EIRSMKDQLDSSSKANDDLKQANSNLTSLLEELKQKIEKLEAEGASLKKEKVDLQAQLQK
LCSEREALEKSKTELAEEHHELKGNSEQMCLELIQQNDTLTKKRDLLLSQQMELNKSLQK
DKEDLLLQVQEFKGQTESLSKAKMLLESQQQTEASDRSKLSSAKDDLSREREDLQTQLFT
LTQEKITLLRSESSLKAEVASVCVERDTMASERNSLHSDLGQLKTTHTGLLGERQGLLEE
NAQMQVKVQDLTQQSVTREKAMDELSANLKVIGVERKALAGEVENLKAQLKERDQEKGDL
AGDQVCLSAKLEKLVNEVSSLAKEKVDLLAIQSRLEKDLSSLHSSQESRDGEHSRLMGEV
EMLQVSQTQLEADAQALRAEKAVMEGQHKASVEEASVSTKVREEMATNLEDLKVQKDALL
KERDKATQQVTQLEAQLKNAFSKQLEAAESSGKTAEVVELLTQEKGLLQQENSKAQSLLE
EFRSAKQEMTNQVYGLDSLKQQNSKYKEELNLSKEQLSSENQKISGLCQEIDELKQAASV
KSQSLVALQEENNKLTRELGSSKKETSGQQKLEAQQSKLNKQLQEMKQRETTMKKQLDEE
KASLQKSIHKSSALISEKDQELETLMSELSVLRGESATAKTLKFTVQLLEKDKARLQEHV
QSLEKSLSGGQDTVTSSSGDAALDQLRENKETAESQAAIEFLNSVIVDLQKKNEELKGKL
EKMAEAALNGNNASELDNYDGGFNKGPSKKKVPPRLFCDICDCFDLHDTEECPTQMQMPD
SPLHTTYHGSKDEERAYCDICEAFGHWTDSCNDDQTF
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaccaagcccagcgggctcaaagcgcccagcaagatgggtaggtcaacgggg
gcgccagccaccaagatcaccccctccgctgccggatccaaagtagctgcagccgacaag
tccactccaggtggcggtgcagctgggacacaagatggcggggagaacttccaggttggg
gagcgagtgtgggtgaatgggaacaaacctggcgtggtgcagttcctgggggaggctcag
tttgcaccaggacagtgggccggcatagttttggatgagcccattgggaagaacgatggc
tcggtggcaggggtgcgctatttccagtgcgaggccctgaaagggatattcacccgcccc
tccaagctgtcctacacagagggcgaggccaacgggactcagacagcacctccgtcccgg
gctgggtcgccgaccccttccaccgccagcctggcctctcacaccccctctgtcaaaaaa
gcctcaactgcaacgcctgccacgtcagccactccagcctccaacctggcacgcacaaac
agcgagtccatctccaacctctcagacaccagctcggtcaagaagggggagagggagctg
aagaatggagaccgcgttttggttggtggcacaaaagctggtgtggttcgttttcttggt
gaaacagactttgccaagggagagtggtgtggtgtggaactggatgagcccctgggaaag
aacgatggggcagtggcaggaaccagatactttcaatgccaacccaagtatggcctgttt
gccccagtccacaaggtcacgcgcattggcttcccctccaccacgccggccaaggcaaag
accacggcgcggaagttggtggccacgccctcgggcctgaagcgcagccccagcgcctcc
tccatcagctccatgagctctgtggcctcctccgtcagcgccaagcccagccgcacaggc
ctgctgactgaaacgtcatcacggtactcgagaaagatctctggcaccacagcagttcag
gaggtgctgaaggagaagcagcagcacatcgagcagctgatggcggagcgtgacatggag
agggcagaggtggccaaggcaaccacccatgtgggcgaggtggagcaggaactgaccctg
ctgagagaggaccaggagcagatggaggccaagatggaccagttacgcaccctggtggag
gctgctgacaaggagaaggttgagctgctcaatcagctggaggaggagaagaggaaagtg
gaggacctccagttccgtgtggaggaagcttgcattaccaaaggagacctggagacgcag
accaaactggagcatgcccacattaaggagcttgaacagagcctgctctttgaaaagacc
aaagctgagaaactccagagagagttagaagacactagggtggccacggtgtcagagaag
tcccgcatcatggaactggagagggacttggtgctgaggaccagggaggtggctgacctg
cggctgcgtctggaggtccagcaaagctcggagggctccgactccaccacctcccctctc
ctggaagaggtgagctctctgagggctcagctggcctctcaggaagaccagcaacgggtt
gagctggctaggctgaaggagacactggcagcggcggagaaggcccacagtgaggcagtg
tctcagttccaagtctcatccactaagatctccacagacaacgagcagttgaagctgcgc
ctcagccagaacgagaaggagaatgcagacatcatagagctgtggcgctccaaactggaa
tctgccatcgcctcacaccagcaggccatggaggagctgaaggtgtccttcagcaaaggg
gccggttcccagacgacagagctggtggagaccaagagtgccctggagaggctgaaggtg
gagcacaagcaggcactggaggaggtgggagccaggtgtgaggcagaggctgcagcccgg
gcacgggagacgggggagctcaacaaacagctgctggtcgtgttggaggagaaggagtgc
ctggaggagagcctgcggtccagtgtggagagtgctgaggagcagcacctggtggagatg
gaggacgtgctgggcaaactgcacactgctgagctgaaggtaaacgagctggaggagcat
gaagctaagcttgtccagcagacccaggacagggccaaggaggtccaggagcagatggca
gctatggaggccctgcagtcccaggcaggccaaggtaaccaagctctccagaacctgagg
acccagctggaggaggcccagagccaagctcgctcacagggcaacagggtcagtgagttg
aactctgagctggagggtaagcagcaggagctcctctccttgcagcagagcctgacctct
gtgctgcaggacaaggtatccttggagcaagagctgggaaacctgaaacaaaaactgtca
gaaagcacagacaatcaggctaagtcaacacaaactatgcaagagctggagaggaggcta
aaggctggagaggagaggcttgatcagctcgcaaatgaaaaggccaagctccaaagtgac
atctcagacatgaagtcatcaggcgacagttcagcacagcttaccaaaatgaatcaagac
atcactcagaaagaaaggtctagtttgactacgtcacgcattttcatatctgagcgaggg
gcccctcctgcggacaagctcatcccctcaaaccccagaggcaagagacagtcctctgac
atgggagtccaaatacctaagaggctggaagagttacagacccaactcgcagaggagaag
gagcgggctgcctgttctgaggagcaacaacagcaggaagttgcccagaaggagcaggag
ctgaagggggccagagacgagcatcagggccagctaagcaacctgcaggggaaaatcaca
caactggagaagagtttgcagcagggtgaggcccaggccaaggatcttcagacctcccag
cagaaggccctgtctgaggcctcagagcaccatgccaagcagctccaggagctgcagggt
caggctgaccagaccaagcaggagctgagtgtctccagggagaaggcccaggagctggag
aggctggtggctgagctgcagccttacaaagagaaggctcagtttctttctgatgagctc
gactcctccgggcagcatattgagcgattgtccacagacctgaagaagcaaatctcagtg
ctggcgcacatgtctaaggaaagctcacatctcaaagctcagaaaggaagtctcaaaaat
caactctccgaactcgaggccaagctctcggcctcggagactagtcaccaggagctctca
ggtaagactgaagaacttctgacactgagggacaagctcacaaaagagcaggaggaactt
tggaccaccaaccggaagctagatggagagaatgcctcactatccagagaggtggagaag
ctcagagttgctgttgaggaggcacaggccaataacaaatccctaagtcaatctgaagcg
gagcgtcagtcccaaattgaggagcttcaaaagacgaatgcagagaagaatgaggtcctt
ttgaagtaccaacaggagatcctgcagcaggaaactaagaggaagcagctagcagaggtc
tatgagaagacctgtgaggagaggaacgagctccaggaggagctcaagcaaagcagggag
aagctgacctctgagaaggatagccttttgttggagagggatgcagccagaaatgctaag
aaatcccttgatgcaaagaatgtggagttgcaggcaaggtgtcagtctttaagcttggaa
aaagaagacttctatctgaaaaacactcagctgcaggcacagacggagaccttgggcaaa
gataaagtggagatgtttactcaaattaatgctgccatttttgacaaagaggccctccaa
gccttgaatgcagagcttcaaaatcagctgaatatcactaagaaggatcttgagaagtct
gtccatgacaaggtcgagctacatgcttcaaaaatgagcctggccaaaatgctggaccag
tccaagaccagcagtgaggttaccgactctgagaggcttcacctcctgcaggagaaagag
gacctgcttgctacccagcgaaaggtgtgttctgagaaagatgaacttatcaaggagaga
gaagagttaaaggagaagctcagactctctacagaggaagtggcaacctctaaggagaaa
gtcaaagagctgttgtcatcttttggtgaggagaaggaagcactttgtctccagaatgca
gagactgagaaggcgctacactccatacgcaaagagaagatggctatagaattaacactg
gaaaagcagaacatggagagtgaccgtttggtacatgaaaaggaggagctggaagaaaag
cacacaaaggagatctctgaaaagtgtactctaacaaaagagcgtgacaagctagcaggt
gagatccgcagtatgaaggaccagctggacagctcctctaaggccaatgatgacctgaag
caagccaattccaacctcacgtccttgctggaggaattaaaacagaagatagaaaagttg
gaggctgagggagcttccttgaaaaaagaaaaggttgatctacaggcacagcttcagaag
ctttgctcagagagggaggcccttgaaaaaagcaaaactgaacttgcagaggagcatcat
gaactaaaaggcaactctgagcagatgtgtttggaactcattcagcagaacgatacccta
acaaaaaagcgggatctcctgctttcccagcagatggagcttaacaagagcctgcagaag
gacaaagaggatctgcttctgcaggtccaggagttcaaaggtcaaacagaatcactttca
aaggcaaaaatgcttcttgaatcgcagcagcagactgaagccagtgaccgaagtaaactg
tcctctgcaaaggatgacctctccagagagagagaggacttacagacacagttgttcact
ctgacacaggagaagattactctcctgcggtctgaatccagcctgaaggcagaggttgcc
tctgtttgtgttgaaagagacacaatggcctctgagagaaatagtttgcatagtgattta
gggcaacttaagacaacccacactggattgttaggtgagagacagggtctgcttgaggag
aatgcccagatgcaagtcaaagtgcaggacctcactcaacaatctgtcaccagagagaag
gccatggatgagttgtctgccaaccttaaggttattggagtggagagaaaagccttggct
ggggaggttgagaacttaaaggcacagctgaaggagagggaccaggaaaagggtgacttg
gccggagaccaagtgtgcctgtctgccaagctggagaagcttgtcaacgaggtctcctcc
ctggctaaggagaaggtagacctcctagctatacagtcccgcctggagaaagacctttcc
tccctccacagcagccaagagagtagggatggggaacactcaaggctcatgggggaggta
gagatgctgcaagtttcccagacacagcttgaagcagatgcccaggccctacgtgctgag
aaggcagtgatggagggacagcacaaagcctctgtggaggaggcatctgtgtctaccaag
gtcagagaagaaatggccaccaacctggaagacctgaaggtccagaaggatgccttgctc
aaggagagggacaaagccacccagcaggtcacccagcttgaggctcaactaaaaaatgct
ttttccaagcagcttgaggcagcggagtcctcagggaagactgctgaggtcgtggagttg
ctgacacaagagaagggccttctgcagcaggagaatagtaaggcccagtctctgctggag
gagttcaggagtgccaagcaggagatgaccaatcaggtatatggactggattccttgaag
caacaaaattccaagtacaaagaggagctcaacctttctaaagagcagctcagctcagag
aaccagaaaataagtggcctgtgccaggagattgatgagctgaagcaagctgcctctgtg
aagtcccagtccctggtggccttacaggaggagaacaacaagctgaccagggagcttggc
agcagcaagaaggagaccagtggccagcagaagctggaagctcagcagtccaagctcaat
aaacagttgcaagaaatgaagcagagagagaccacaatgaagaaacagttagatgaggag
aaagcctccctccagaagtccatccataaaagcagcgccttgatctctgagaaggatcag
gagctggagaccctgatgagtgagttatcagtgctgcgtggggagagcgccacagcgaag
acactgaagtttactgtccagttactggagaaggacaaggcgcggctgcaggagcacgtt
cagagcctggagaagagcctttcaggaggacaggatactgttaccagctcctcaggtgac
gcagctttggatcaactaagggagaacaaggagactgcagaaagccaggcagcgattgag
ttcctgaactcggttatcgtggacctgcagaagaagaatgaggaacttaagggcaagctg
gagaagatggcagaggctgccctgaatgggaataatgcaagcgagcttgacaactatgac
ggcggttttaacaaaggcccctccaaaaagaaggtcccacccaggctcttctgtgacata
tgtgactgcttcgacctccatgatacagaagaatgtcccactcagatgcagatgccggac
tccccactccacaccacctaccacggcagtaaggatgaggagagagcttattgtgacatc
tgtgaggcctttggccactggactgactcctgtaacgacgaccagaccttctaa
DBGET
integrated database retrieval system
