Salmo salar (Atlantic salmon): 106580462
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Entry
106580462 CDS
T04363
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2-like
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106580462
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106580462
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
106580462
NCBI-ProteinID:
XP_014017040
UniProt:
A0A1S3NNN4
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All DBs
Position
ssa02:complement(21901253..21912073)
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AA seq
608 aa
AA seq
DB search
MGDKQQDSVERQSRQQMAHRQQSWGQICRDRLADTGSLRPADGNKNQTSNSLQQVTASGN
SKRRKKKRGKKKRSAEKMEDKEGEMGKSTPLQSVLVQPQSEESNPAKFLSVQPDPPLGQS
NREKTTPEQPIPEQPKPETPKLAQRNPAQPSTGHQNPATLPSALSPHQSSPDQPDQSSPH
QSSQDQSSPDQPDQSSPHQSSPDQSSPHQSSPDQPDQSSPHQSSPDQSSPHQSSPDQPEQ
SSPHQSSPDQSSPQQSSPDQPEQSSPHQSSQDQSSPQQSSPDQPEQSSPHQSSQDQSSPQ
QSSPDQPDQSSPHQSSPDQSSPQQSSPDQPDQSSESSPDEEKPKKKGDPNKLTLLTWNID
GLDLDDIKERLSKLLDYLIKYHPDIVLLQEVISPIYQVLQQVLKPYHLLPGSDRSYFTAI
LLRKSRVQLLESSLVNYPTTEMRRNLLMAHVSFLGHPLCVMTSHMESMKPKSLERQNQLR
TVWKTMREQPQDCSVIFGGDTNLRDWEVKNQGGLPESICDVWESLGQPEDCRYTWDCVTN
DNKDLPFPARLRFDRIFLRQAGKGSKVSPDGMTLVGLKRLDDCQRFTSDHWGLLCTFVIK
PLSQATPE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagcaacaagactcagtggaaaggcagagcaggcaacagatggcacacaga
cagcagagttggggacagatatgcagggacagactggcagacacagggagtctcaggcca
gcagatggcaataagaaccagacgagtaactccctccaacaggttacagcctctggaaat
tccaagaggagaaagaagaagagaggaaagaaaaagaggagtgccgagaagatggaggac
aaggagggagagatgggaaaatctaccccattgcagtctgtcttggttcaaccacaatca
gaggaatctaacccagccaaattcctatcagtgcaacctgacccacccttagggcaatct
aatcgagagaaaactacaccagagcaacctatcccagagcaacccaaaccagagacaccc
aaactagcacaacgtaatcctgcccaaccatctacagggcatcaaaacccagccacgctc
ccttcagcactatctccacaccagtcatcaccagatcagccagatcagtcatctccacac
cagtcatcacaagatcagtcatctccagatcagccagatcagtcatctccacaccagtca
tcaccagatcagtcatctccacaccagtcatcaccagatcagccagatcagtcatctcca
caccagtcatcaccagatcagtcatctccacaccagtcatcaccagatcagccagaacag
tcatctccacaccagtcatcaccagatcagtcatctccacaacagtcatcaccagatcag
ccagaacagtcatctccacaccagtcatcacaagatcagtcatctccacaacagtcatca
ccagatcagccagaacagtcatctccacaccagtcatcacaagatcagtcatctccacaa
cagtcatcaccagatcagccagatcagtcatctccacaccagtcatcaccagatcagtca
tctccacaacagtcatcaccagatcagccagatcagtcatcagagtcatctccagacgag
gaaaaacctaagaaaaagggagatccaaacaaactcacccttctgacctggaacatagac
ggcctggacctggacgatatcaaggaacgtctttcaaagctactggactacctgatcaag
taccatcctgacattgtgctactgcaagaggttatttcaccaatttaccaggttttacag
caggttctgaagccatatcatctgttgccgggtagtgacagaagctatttcactgccata
ctgctaaggaagtccagagttcaacttctggagagtagcttagtgaattaccctaccaca
gagatgaggagaaacctgcttatggcccatgtttctttccttggccatccgctgtgtgtg
atgacgtcccacatggagagcatgaagcccaaatccctggaacgccagaaccagctgagg
acggtgtggaagacaatgagggagcaaccccaggactgcagcgttatctttgggggagac
accaacctcagggactgggaggtgaagaaccagggcggtctacccgagagcatctgtgac
gtatgggagtccctgggccagccggaagactgccggtacacctgggactgtgtcaccaat
gacaacaaggacctccctttccccgcacgtctgcgcttcgaccgcatcttcttgaggcag
gccggcaaggggtcaaaggtcagcccagatggcatgaccctggtgggtctgaagaggttg
gatgactgtcaacgctttaccagcgaccactggggtctcctctgcaccttcgtcataaaa
cctctcagtcaagcaacacctgaatga
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