Salmo salar (Atlantic salmon): 106580505
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Entry
106580505 CDS
T04363
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106580505
03041 Spliceosome [BR:
sasa03041
]
106580505
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106580505
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106580505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106580505
NCBI-ProteinID:
XP_014017126
UniProt:
A0A1S3NPJ7
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All DBs
Position
ssa20:complement(34312938..34323289)
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AA seq
388 aa
AA seq
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MRPWTSALIFRHLPLRLCTHCSYKLITAGFQSATEGTTYENMMMMMDDEQPKTLYVGNLS
RDVTEPLILQVFTQIGPCKSCKMIFDTAGNDPYCFVEFYEHRHAAASLSAMNGRKIMGKE
VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDIATGKS
KGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPSAPKTTYETNTKHLAFDEVV
NQSSPSNCTVYCGGVSTGLTEQLMRQTFTPFGQIMEIRVFPDKGYSFVRFNSHEGAAHAI
VSVNGTSIEGHMVKCYWGKETPDMISSMQQVQQVPQQNKVGFAAQPYGQYAQWYGNAQQI
GQYVPNGWQVPTYGVYGQAQAWNQQGFQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgtggacatccgctcttattttccgccatcttccacttcggttgtgcacccat
tgttcatacaagctgatcacggctggttttcagtcagcgactgagggcacgacctacgaa
aacatgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacctgtct
agggatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagc
tgtaaaatgatttttgatactgcaggcaatgatccatactgctttgtggagttctatgaa
cacaggcatgctgctgcttcgctgtctgccatgaatggacgtaaaattatgggtaaggag
gttaaagtcaactgggccacaacgccaagcagtcagaaaaaagacacaagcaatcatttc
catgtctttgttggagacctcagccccgaaatcacaacagatgatgtcaaagctgccttt
ggcccatttgggaggatatcggatgctcgtgtggtcaaagatattgccacagggaaatct
aaaggctatggttttgtctctttcttcaacaagtgggatgcagagaatgccattcagcag
atgggtggccaatggctaggcggcagacagatcaggaccaactgggccacgagaaaaccc
tcagcccctaaaaccacctatgaaaccaacaccaagcacctggcctttgatgaggtagtg
aaccagtcaagccccagtaactgcactgtgtactgtgggggagtcagcaccggtctaaca
gaacaattgatgagacagaccttcaccccctttggacaaatcatggaaatccgtgtgttc
ccagacaaaggatattcctttgtgaggtttaactctcacgagggagcagcccatgccatt
gtgtctgtgaatgggacttcgatagagggacatatggtgaagtgttactggggtaaagag
accccggacatgattagctctatgcagcaggttcagcaagttccccagcagaacaaagtg
ggctttgcagcccagccctatggccagtatgcccagtggtacggcaatgcccagcagatt
ggccagtacgtccccaacgggtggcaagtacccacctatggcgtttacggccaggcccag
gcctggaaccagcagggttttcagtaa
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