Salmo salar (Atlantic salmon): 106580571
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Entry
106580571 CDS
T04363
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sasa01100
Metabolic pathways
Module
sasa_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
106580571
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sasa01003
]
106580571
Enzymes [BR:
sasa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
106580571
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
106580571
Glycosyltransferases [BR:
sasa01003
]
Glycan extension
O-Glycan
106580571
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
TOBE_3
Motif
Other DBs
NCBI-GeneID:
106580571
NCBI-ProteinID:
XP_014017246
UniProt:
A0A1S3NP95
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Position
ssa20:37833038..37841183
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AA seq
542 aa
AA seq
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MCSESTMLRRWLLALVARVGVIALVVCCCLSLLYLLACKPPSSYSHEQAQVWAGGATSKE
GYLALLQESEDTHRHYINSLSKQIAQLKEALQMRTQQLQESLEKARAKGVLPMGLEGLRR
PQTHTDLQEFFKAQLSRAEVQSGEKLPSEYAVIPFESFTLHRVYQLEMGLTRHPEERPVR
KDRRDELTGTLEIALQVLNGPRRHGERRRRSYSPSDFIEGLTRTERDKGTVYELMFKGEG
PQDFRQLVFFRPFGPVVRVKNERVDTRHMLINIIVPLSRRADTFRQFINNFRKVCIQQEG
KTHLTVVYFGRDQIEEVKAIMDQTSRETQFRNFTLIQLNEEFSRGRGLEVGARAWRRSHN
VLLFFCDVDIHFTLDFLTSCRLNAEPGKKVFYPVLFSQYNPSLIDNNQSPFPSIQQQLVI
MKDAGFWRDFGFGMTCQYRSDFINIGGFDRNTKGWGLEDVHLYRKYLHSKLMVIRSPSRS
LFHLWHEKQCADELQPDKYKMCMQTKAMSEASHGHLGELFFTQEIQEHLERQKLLNDSSH
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctgaatccacaatgctccggaggtggctgttagctctggtggcccgtgttggg
gtcatagcactagtggtgtgctgctgcctgtctctactctacctgctggcctgcaaaccc
cccagcagctacagccatgaacaggcccaggtctgggctggaggagccaccagtaaagag
ggttacctggcgctactgcaggagagcgaggacacacacaggcactatattaacagtctc
agtaagcagatagcccagctcaaagaggctctccagatgaggacccagcagctgcaggag
tctctggaaaaggccagggccaaaggggttctacctatggggctggagggcctgcgtagg
ccccagacacacaccgacctccaggagttcttcaaggcccaattgagccgggctgaggtc
cagtctggtgagaagttgcccagtgagtacgccgtgattcccttcgaaagcttcaccctg
cacagggtgtaccagctcgagatggggctgacccgtcatccagaggagaggcctgtgagg
aaggaccggagagacgagctgacaggcacgttagagatagccctgcaggtcctcaacgga
ccccggagacacggggagcgccgccgacgctcctattcaccatcggacttcatagagggg
ctgacccgtacagagcgtgacaaggggacagtgtatgaactgatgtttaagggcgagggg
ccgcaggacttcagacagctggtgttcttcagacccttcggcccggtggtcagggtgaag
aatgagagggtggacacacgccacatgctcatcaacatcatagtaccactgtccaggagg
gctgacacattcagacagttcatcaacaacttcagaaaggtgtgcatccagcaggaaggg
aagacccacctcactgtggtctactttggaagggaccagattgaagaggtcaaagctatc
atggatcagacatccagggaaacccagttccggaacttcacgctgatccaactgaacgag
gaattctctcgtgggcggggcttagaggtgggcgcgcgggcctggaggcggagccacaac
gtgctgctcttcttctgcgacgtcgacatccactttaccctagacttcctcacttcctgc
agactcaatgcagagcctggtaagaaagtgttctacccagttctcttcagtcagtacaat
ccatctcttatcgacaataaccagagtcccttcccttctattcaacaacaactggtgata
atgaaggatgctggattctggagagattttgggtttggcatgacttgccagtataggtct
gatttcatcaacataggtgggtttgaccggaacaccaaaggctggggtttggaggatgtt
cacctatacagaaagtacctgcacagcaagctgatggtgattcgctctccctcccgtagc
ctcttccacttgtggcatgagaagcaatgcgcggacgagctgcagccagacaagtataag
atgtgtatgcagaccaaggccatgagcgaggcctctcacggccacctgggggagctgttc
ttcacacaggagatccaggagcacctggagaggcagaaactactgaacgactcaagtcac
ttgaggtag
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