Salmo salar (Atlantic salmon): 106580711
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Entry
106580711 CDS
T04363
Symbol
mef2d
Name
(RefSeq) myocyte enhancer factor 2D
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
106580711 (mef2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106580711 (mef2d)
04131 Membrane trafficking [BR:
sasa04131
]
106580711 (mef2d)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
106580711 (mef2d)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106580711 (mef2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
106580711
NCBI-ProteinID:
XP_014017520
UniProt:
A0A1S3NQP1
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All DBs
Position
ssa02:24059911..24143942
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AA seq
566 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNVDIMEALNKKEHRDSESPDPEEPFSLTPHTEEKYKKIDE
EFDKMMQSYRLSSAVPQPTFSMPVTVPVSNQNALQFSNSGGLVTTSFVTSTLTDPRLLSP
QQPSLQRNTGSPGLPQRPASAGALLGGELNNSNGGCPSPVPNGYISARASPGLLSVSNGN
SLGKVAKSPPPPSPQMVNSRKPDLRVITSQSGKSLMQLTDEELELVSENAQRLGGSQGNL
STPVVSVATPSLLAPFSAMQTTYNTEYQLTSADLTALQTFTPSGLLPSNMSTWQQQPAVS
QQQQQQQQQQHQQQQQISLASLSNLVMWGAEKQNGEMANCISNFAANLSMASQSNLLFGR
EEGLCWPVGHLPQGTMLTINTNPNISIKSEPVSPNRDRSTPCSTAGGGGGGGLVTITGAP
MSGQYPGALRLEPSTLQGRSPVGSLSSNGSSYEGDRDDGAQGRAQDFHHQVGASSGMGLL
RPSSTQEQQEQEGANVKRMRLDTWVT
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaaaaagatccaaatacagaggatcacagatgaacggaacagacaggtgacg
ttcaccaagaggaagtttggcctgatgaagaaggcatatgagctgagcgtgctgtgcgac
tgtgagatcgccctcatcatcttcaaccactccaacaagctgttccagtacgccagcacc
gacatggacaaggtcctgctcaaatacaccgagtacaacgagccccacgagagccgtacc
aacgtcgacatcatggaggctctgaacaagaaagagcaccgggactcagagagcccagac
cccgaggagcccttctccctcaccccccacactgaggagaaatacaaaaaaattgacgag
gagtttgataaaatgatgcagagctataggctgtcatcagccgtcccacagcccaccttc
tccatgcccgtcacggtgccagtgtccaatcaaaacgctctccagttcagtaactctggc
ggtctggtcacaacctccttcgtcacctccaccctcacagacccccgcctgctgtcgcca
caacaaccatctctccagaggaacactgggtctccagggttaccacagcgaccggccagc
gcaggtgctctattaggaggtgaactgaacaactccaacggaggatgcccgagcccagtt
ccgaacggctacatcagtgccagggcctcccccggcctcctctccgtctccaacggcaac
agcctggggaaagtagccaagtctccacctccgcccagccctcagatggtgaacagccgc
aagcctgatctccgggtcatcacctcccagagcggcaagagcctgatgcagctgaccgat
gaggagctggagttggtgagtgagaatgctcagcggttaggtggttctcaagggaacctg
tccacgccagtggtttccgtggcgacgcccagtctcctagcccccttctccgccatgcag
acgacctacaacactgagtaccagctgacaagtgcggatctcacagcgctccagacattc
acaccatcagggctgctgcctagcaacatgtccacctggcaacagcaaccagcagtgtct
cagcagcaacagcagcaacaacaacagcagcatcaacaacaacaacagattagcttggcg
tcactcagtaacttggtcatgtggggcgcagagaaacagaacggggagatggctaactgc
atctccaatttcgctgctaacctgagcatggcctctcaatcaaacttgctatttggcagg
gaagagggtctctgctggccggttggccacttacctcagggcaccatgctgacaattaac
accaaccccaacatcagcatcaagtcggagcccgtgtcgcccaaccgcgaccgcagcacc
ccgtgctccacagccgggggtggcggaggagggggcctagtgaccatcacaggggcccct
atgtcaggccagtacccaggggccctgcgcctggagccgtctaccctgcagggccgctcg
cccgtcggcagcctgagcagcaacggcagctcctacgagggggaccgggacgatggggcc
caggggcgggcccaggacttccaccaccaggtaggggcctcctcgggcatggggctcctg
aggccctcgtccacgcaagagcagcaggagcaggagggggccaatgtgaagagaatgaga
ctggacacttgggtcacatag
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