Salmo salar (Atlantic salmon): 106580729
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Entry
106580729 CDS
T04363
Symbol
TISB
Name
(RefSeq) zinc finger protein 36, C3H1 type-like 1
KO
K18753
butyrate response factor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
106580729 (TISB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106580729 (TISB)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106580729 (TISB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
Torus
Motif
Other DBs
NCBI-GeneID:
106580729
NCBI-ProteinID:
XP_014017548
UniProt:
C0HBD5
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Position
ssa20:45396553..45399798
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AA seq
400 aa
AA seq
DB search
MPSDFLTPFLELEDEFCKNFRGLDMPDGAPATTQMQRVVGFQRRHSLCPVTLPNSKFNSG
SVDPIGEPACWALTNTANQQWSLKHQQQLPRSSLNLIPFRVDRSVSMIEGHVGSLGYSEQ
QLPTTPPLMPPPGLSISTSCLSSPKSLAPSPPISTRYKTEMCRTYEESGTCKYGAKCQFA
HGTDEQRDLSRHPKYKTEPCRTFHTIGFCPYGARCHFIHNADEQLGPDGGAPPQRQKMRE
RPQLLRHSISFAGFSSPQALTGFQPVPETMLFSRASSVSSPPSTGSPELQSPLFLEPATL
KHNYPFSSDFGNDQINNNPHFYAITDSKCQTVCAQKSAAHNSHRNAFSFTGLPATQRCAS
PDSLSDQEGYTSSSSLSGCESPGLEGRRLPIFSRLSVSDD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgacttcctaacgccgtttttggaactggaggatgagttctgcaagaatttc
cgtggtctggacatgccagatggcgcaccagccaccacgcagatgcagcgcgtcgtggga
tttcagcgcagacactcactatgcccggttaccctgcccaactcaaagttcaacagcggc
agtgtggacccaatcggcgagccagcctgctgggcccttactaacactgctaaccagcag
tggagcctgaaacaccagcaacagttgccccgctcctctctcaacctcatcccattccgt
gtggaccgttcggtcagcatgatagagggccatgttggcagcctcgggtacagcgagcag
cagctccccaccacccctcctctgatgcccccacccggcctaagtatcagcaccagctgc
ctgtcatctccaaagtcactcgccccttcccctccaatctccacccggtacaaaaccgaa
atgtgccgcacttacgaggagagtggcacatgcaaatacggagccaagtgtcagtttgcc
cacggcacggatgagcagcgtgacttgagcaggcacccgaagtacaaaaccgaaccttgc
cgcacgttccacaccattggcttctgcccctatggcgcccgctgtcacttcatccataat
gcggacgagcagctcgggcccgatggcggagcgccacctcagcgacagaagatgagagaa
cgcccacagctgctgcgtcacagcattagtttcgctggcttctcctctccccaagcgctg
accggattccaacccgttccagagaccatgctgttctccagggcttcctcagtatcatcc
ccgccctccacaggtagcccagaactgcagtccccattgtttctagaacctgctacacta
aagcacaactacccgttctcatctgacttcggaaacgatcagattaataacaaccctcac
ttttacgccatcactgactctaagtgccaaactgtctgtgcgcaaaagtctgctgcacat
aactctcaccgcaatgccttctcattcaccggcctgcctgccacgcagcggtgtgcttca
cctgactctctttccgaccaggaaggctataccagctccagtagcctgagtggttgtgag
tcccctggccttgagggcaggcgtctccctatctttagccgcctctctgtctcagatgac
taa
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