Salmo salar (Atlantic salmon): 106580853
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Entry
106580853 CDS
T04363
Symbol
SFRS7
Name
(RefSeq) serine/arginine-rich splicing factor 7-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106580853 (SFRS7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106580853 (SFRS7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106580853 (SFRS7)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106580853 (SFRS7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC_3
zf-CCHC
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
106580853
NCBI-ProteinID:
XP_014017811
UniProt:
A0A1S3NRH9
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All DBs
Position
ssa20:complement(49746941..49752036)
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AA seq
285 aa
AA seq
DB search
MVSLPRPIITIITNVKKTHDLTVARHVTAQVHSCTGSLTERRIGGEMSYHSSSRSSSRNT
DCKVYVGDLGNGAAKGELERAFSYYGPLRTVWVARNPPGFAFVEYEDARDAEDAVKGMDG
KVLCGSRIRVELSTGMSRKTKHGRPSRRHFDPQDRCYQCGDRGHYAYDCYRFSKRGGGRR
SRSRSRSRSRSISRSRGSRYRSRSRSNDRSRHRSPSYPKRRRRSGSPVRSKSRTSVRSRS
RSRSGSRARGRSASRSRSRSRSPSHKRNSRSRSPRQKKSPTPGED
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtttgccaaggccgataataaccatcataaccaatgtgaagaaaacacatgac
ctcactgtagcgaggcacgttactgcgcaagtgcattcttgcacgggtagtctgacagaa
cggcgaataggtggggagatgtcataccactcgtcttctcgcagctcttctcgtaacacc
gattgcaaggtctatgttggcgacttaggcaacggtgctgccaagggtgagctagagcgg
gcgttcagttactatggccctttacgcacggtttgggtggccaggaaccccccaggtttc
gcctttgtggagtatgaggatgcccgtgacgcagaggacgcagttaaaggcatggatgga
aaggtgctgtgcggctctcggatccgtgtggagctgtccactggcatgtcacggaagacc
aaacatggccgccccagccgccgccactttgaccctcaagaccgctgctaccagtgtggg
gacaggggccactatgcctatgactgctaccgtttcagcaagaggggaggaggtcgtcgg
agcagatcacgctctcgctcccggtctcgttccatctcaaggtcacgtggcagccgctat
cgatcccgctcccgcagcaatgaccgcagcaggcaccgctccccatcttatcccaaacgt
aggaggaggtctggttcccctgtgcggtcaaagtccaggacctctgttaggagtcgttcc
cgttctcggtcagggtcccgggccagaggtcgctcggcgtctcgctctcgctccagatcc
cgctctcccagccataagaggaatagtcgttccagatctccaagacagaaaaagagcccc
accccaggcgaagattga
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