Salmo salar (Atlantic salmon): 106580963
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Entry
106580963 CDS
T04363
Name
(RefSeq) structural maintenance of chromosomes protein 4-like
KO
K06675
structural maintenance of chromosome 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106580963
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
106580963
Condensin II
106580963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
CCDC113_CCDC96_CC
HOOK
Tropomyosin
HIP1_clath_bdg
TPR_MLP1_2
HMMR_N
COG6_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
106580963
NCBI-ProteinID:
XP_014018037
UniProt:
A0A1S3NRJ1
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Position
ssa20:53318518..53340188
Genome browser
AA seq
1295 aa
AA seq
DB search
MPAKTSKSSTASKSRGKGSQPRDDSEDELDVPLKEANSNGQEAPPTNYPAPGEGADDVDN
RSLEEILGSIPPPPPPAMTNAPGSPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDLHKDVQSCTVEVHFQKIIDKEGDDY
EVIPNSKFYVSRTASKDNSSSYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQI
AMMKPKGQTEHDEGMLEYLEDIIGSCRLKQPIHTVSRRVELLNEQRGEKLNRVKMVEKEK
TALEGEKNTAVEFLTLENDIFKQKSQLCQYYVYDLQKRVANKEEEKQRIQDDTKELTEKN
NNIAEEMEKKNQDLKNVEKKQGKLTKYIEGQKEKFTQLDLQDVEVREKLKHTKSKTKKLQ
KQLDKDKEKLEEVRNVPASSEKTISEASARREELEKQKGKEEEKLKEVMASLKEETSGLQ
QEKETKEKELMELSKAVNETRSRQDVAQSELDIYLSRHNTAVTQLNTAKQSLQTTTDTLR
DRRAAIKELQVKIPQCEQELKKDEAELEQLLQADGQARELVRDMRQKVEEAKSSLSSNRS
RGKVLDALMQQKSSGKISGILGRLGDLGAIDEKYDIAISSSCGSLDNILVDSIDTAQKCV
NFLKAQNIGVATFIGLDKMKVWENKMGPISTPENIPRLFDMVRVQDESMKPAFYFALRDT
LVAKDLEQATRLAFQKDKRWRVVTMQGQIIEMAGTMTGGGGRVMRGRMGSSIGTEVTQQE
LDRMESKLNEKVVQLQGCQERKLQLEEKVQQLRQQLRDMKNTLEKYTNSMQSLAEQEAHL
KPQIKELEANVLAAAPDKNQQKQLEKSLKDFQKDFEAASSKAGKVEAEVKRLHTIIVDIN
SHKLKAQQDKLDKVNKELDDCSSAITKAQVAIKTAGRNLKKCEEGVSRLEGELVENEKSL
GDLTEHLKRLEEEAGEIMKACQEAEAALPEVQGQHQGVVREIKALQEQEHALQEESLGVR
LRVEQIDTSITEHTNKIKHWQREASKLSLHAIEDKPAEALPVLTPADMVAIKGPDVITNQ
ISLMEARCAQMKPNLGAIAEYKKKEELYLKRVAELDEITTERDNFKRGCEDLRKQRLNEF
MAGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGE
KTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNM
FEIADRLIGIYKTHNTTKSVGINPKTIVFKEPISV
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaaacgtcgaaaagttcaactgcttccaagtctagagggaaagggtcgcag
cctcgggatgactccgaagacgagttggacgtaccccttaaagaagcgaactccaatggc
caagaggcaccgccgacaaattatccggctcccggggagggtgccgatgatgttgataat
cgaagtttggaggagattcttggtagcatccctccacccccgcccccagcaatgaccaat
gcaccaggctctcctcgcttgatgataacacatatagttaatcagaacttcaaatcctac
gctggcgagcagattctgggccctttccataagcgcttttcctgtatcattggtccaaat
ggcagtgggaagtccaacgtgatagattcaatgctctttgtgttcggctatagggctcaa
aaaatcagatccaaaaaactctctgtgctgattcacagctctgacctgcacaaggatgtg
cagagctgcactgtggaagtgcattttcagaaaattattgacaaggaaggagatgactac
gaagtcatccccaacagcaagttctatgtttccagaactgccagcaaagacaattcctca
tcctaccacatcaatggcaagaaggccacttttaaagatgtgggaacgctgctgcgtagc
catggcattgacctggaccacaacagatttctgattttacagggtgaggtggagcagata
gccatgatgaagcccaaggggcagacggagcatgatgagggcatgctagaataccttgag
gacatcattggctcctgccgcctgaagcagcccatccacaccgtgagccgccgcgtggag
ctcctcaacgagcagaggggagagaagctaaacagggtcaaaatggtggagaaggagaag
actgctctggagggagagaagaacacagccgtggagttcctcactctggagaatgatatt
ttcaaacaaaagagccagctctgccagtactatgtctatgacctccagaagagagtggca
aacaaagaggaggaaaagcagaggatccaagatgacaccaaggaactcacagagaaaaac
aacaacattgctgaggaaatggagaagaagaaccaagacctgaaaaacgtggagaagaaa
caaggcaagctgaccaagtacatagagggccagaaggagaagtttacccagctggacctg
caggatgtggaggtccgagagaaactgaagcacaccaagagtaagaccaagaaactacag
aaacaactggacaaggacaaggagaagctggaggaggtgcgtaacgtgccggccagcagt
gagaagaccatctctgaggcgtctgcgcgcagggaggagttggagaaacagaaggggaag
gaggaggagaaactgaaggaagtgatggcgagtctgaaggaggagaccagcggcctgcag
caggagaaggagactaaggagaaggagctgatggagctgagtaaggctgtgaatgagaca
cgttcccgtcaggacgtggcccagtctgagctggacatctatctgagtcgccacaacact
gctgtgacccaactgaacactgccaagcagtccctgcagaccaccaccgacacgctgcga
gaccgccgcgccgccatcaaagagctgcaggtcaaaataccccagtgtgagcaggaactc
aagaaggatgaggcggagctggagcagctgctgcaagcagacggacaggccagggagctg
gtgagggacatgaggcagaaggtggaggaggccaagagctccctgtcctctaaccgcagc
cgggggaaggtgctggacgccctcatgcagcagaagagtagcggcaagatctccggcatc
ctgggacgactaggtgaccttggggccatcgatgagaagtatgacatcgccatctcatcc
agctgtggctctctggacaacatcctggtggacagcatcgacacggcccagaaatgtgtc
aacttcctcaaggcccagaatatcggtgtggccacttttatcggcctggacaagatgaag
gtgtgggagaataagatggggcccatctccaccccagagaacatcccccgtctgtttgac
atggtgcgggtgcaggatgagagtatgaagccagccttctactttgccctgagggacacc
ctggtggccaaggacctggagcaggcaacacggcttgccttccagaaggacaagcgctgg
agggtggtcaccatgcagggacagatcatagagatggctggcaccatgactggaggtgga
gggagagtgatgcggggtaggatgggctcctccatcggcactgaagtcacccagcaggag
ctggaccgtatggagagcaagctgaatgagaaggtggtgcagctgcagggctgccaggaa
aggaagctgcagctggaggagaaagtccagcaactcagacagcagctcagagacatgaag
aacactctggagaaatacaccaacagcatgcagagcttggcagagcaggaggctcacctg
aagcctcagattaaagagctagaggccaatgtcctggcagctgcccctgacaagaaccaa
cagaaacagttggagaagagcctgaaggacttccagaaagactttgaggcagcctcaagt
aaggcagggaaggtggaggctgaggtgaagaggctccacaccatcattgtggacatcaac
agccacaagttgaaggcccagcaggacaaactggacaaggtcaacaaggagctggacgac
tgctcctcagccatcaccaaggcccaggtggccatcaagactgcagggcgtaacctgaag
aagtgtgaagagggtgtaagtcgcctggagggggagctggtggaaaatgagaagagcctg
ggagacctgacggagcatctgaagaggttggaggaggaggctggggaaatcatgaaagcc
tgccaggaggctgaggcggcactgccggaggtgcaagggcagcaccagggggtggtgagg
gagatcaaggccctgcaggagcaagagcatgctctgcaggaggagtccctcggcgtccgc
ctccgagtggagcagatagacacctccatcaccgaacacaccaacaagatcaaacactgg
cagagagaggcctctaagctttcccttcacgccattgaggacaaaccagcggaggcgctg
cccgtgctgacccctgctgacatggtggccatcaaggggcctgacgtcatcaccaaccaa
atctccctgatggaggcccgctgtgcccagatgaagcccaacctgggagccatcgcagag
tacaagaagaaggaggaactgtacctgaagcgtgtggctgagttggatgagatcaccaca
gagagagacaacttcaagcgtggctgtgaggacctgcgcaagcagaggctcaacgagttc
atggctggcttcaacatcatcaccaacaagctaaaggagaactaccagatgctgacgcta
gggggtgacgctgagctggagctagtcgacagcctggaccccttctctgagggcatcatg
ttcagtgtgcgtccccctaagaagagctggaagaagatcttcaacctgtctggaggagag
aagaccctgagctctctggccctggtgtttgctctgcaccacttcaagcccacgcctctc
tactttatggatgagattgatgcagccctggactttaagaacgtctccatcgtggcctgt
tacatttatgagcaaaccaagaacgctcagttcatcatcatctccctgaggaacaacatg
tttgagattgctgaccgtctgatcggcatctacaaaactcacaacaccaccaaaagcgtg
ggaatcaaccctaaaaccattgtcttcaaagagccaatctcagtttag
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