Salmo salar (Atlantic salmon): 106580978
Help
Entry
106580978 CDS
T04363
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
sasa
Salmo salar (Atlantic salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Paramecium_SA
Motif
Other DBs
NCBI-GeneID:
106580978
NCBI-ProteinID:
XP_014018070
UniProt:
A0A1S3NRM9
LinkDB
All DBs
Position
ssa02:complement(23344797..23498174)
Genome browser
AA seq
1131 aa
AA seq
DB search
MRLVPGSPQPLPLLAVGLALALTALLPHLAMGVTPFPQDLEPISIVGREHSYLYPSFQGL
MSDNDTVRLGLDFQRMLRINHMLYIAARDHVFAISLSASSEQIVPQQKLTWKTKDVDKCT
VRGKNSNQSLAQAASASQSSSETIEISTGIMDECYNYIKVLVPRNDETLFACGTNAFNPT
CRNYKMSTLEQDGEEVVGQARCPFESRQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGE
SSPVLRTVKYDSKWLREPHFLHAIEYGNYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDN
GGSPRVLERYWTSFLKTRLNCSVPGDSFFYFDVLQSLTNVLQINHRPAVLGVFTTQANSI
TGSAVCAFYMDDIEKAFNGKFKEQRNSESTWTPVPEEQVPKPRPGCCAGDGSAAAYKSST
TFPDDTLTFIKNHPLMDEAVPSVNHRPYFTRTTSRFKLTQLAVDTSAGPYKNHTVLFLGS
EDGRVLKILASTHLNASFSTQLLEDIDVYNPTKCNVRGEDRRVLGLELDREHHALFVAFS
SCVVRVPLSRCSDYGSCKESCLSSRDPYCVWQRTGSCATVVPGFRGGFEQDVENGYPHYP
DSCHDVLATTRKQNTLADSAYGKTTPTTTASTTNQVAPFPKVAGDSERGTGPDGGPPVPV
GDQGSPDSEPISVEMEGVRRPPEMEKTNHSVHYTLLIACVLVAFVLGAFLSGFLVSCYCN
HTGNKTKRLAKDPEAPIPHALSLRSLAKLNGLLDSQNKEDKMEVSSPKLYNSFFQNGKEH
RQGAPRRNGGHHPGMTMGDLVHPHHLHHSSELSGLPTPDSTPELPIKNMKAFKNQWEKNQ
NCNNAKEPKSHNMGQGSRPSSGLLHQQIYPYSHSFSNGQALANGHALVGGPQHLEERKIH
NTERMLVQQPYPCYPQKVMEVTSLDELLKHIHEANSSKNTQVMTSSGLSASGGCHGGQLA
FANRVQPHIPETESAPYYSSSTLPRDSLTRRMDVPPDMPPHHQSTLERRHSSQRHSLITA
ATKIANGGGGGGMVHRQQSFSQRNGHQHQPPPMLARMNSTGSACEIHYPLIPNGYLTRQQ
SYNGEQQEDTGGYLHRGAIVRRTTSLKPDVPPKPLFIPASSPVNQQGNFNY
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggtgcccgggtcgcctcagcccctcccccttctggcagtgggcctggctcta
gctctcacagccctcttacctcacctggccatgggagtcacacccttcccccaggacctg
gagccaatcagcattgtagggagagaacactcctacctgtacccaagcttccagggcctc
atgtcagacaacgatacagtacgactgggcctggacttccagaggatgctccggatcaac
cacatgctctacatcgccgccagggatcatgtgtttgctatcagtctcagcgcctcctct
gagcagatcgtcccacaacagaaattgacttggaagacaaaggacgtggataaatgcaca
gtgagggggaagaacagcaaccagtctctggcacaagcagcgtcagcctcccagagctct
agtgaaaccatagagatcagcacagggattatggatgaatgctacaactacatcaaagtt
ctggttccacgcaacgacgagacgctatttgcctgcgggaccaacgcctttaaccccacc
tgccgcaactacaagatgtccacactggaacaggacggtgaggaggtggtgggtcaggcc
cgctgtccctttgagtctcgccaatccaacgtcggcctcttcgctggtggtgatttctac
tcggccaccatgacagacttcctggcgagtgacgcagtaatttaccgtagtctgggagag
agcagcccggtgcttcgtaccgtgaagtacgactccaaatggctacgagagcctcatttc
ctccatgccattgagtacgggaactacgtgtacttcttcttcagtgagattgctgtggag
tacaccacacttggcaaggttgtgttttccagagtggctcgtgtatgtaagaacgacaac
ggaggttctcccagagttctagagcgttactggacgtcgttcctcaaaacgcggctcaac
tgctcggtgccgggcgattccttcttctactttgacgttctgcagtcgctgaccaacgtg
ctgcagatcaatcacagaccagccgtgctgggggtcttcactacacaggccaacagtatc
acaggctcggcagtatgtgcattctacatggacgacattgagaaggccttcaatgggaag
ttcaaggagcagaggaacagtgagtcaacctggacgcccgtgcctgaggagcaggtaccc
aaacccagaccaggctgctgtgccggcgatggctctgccgctgcctacaagtcgtccacg
accttccccgacgacaccctgaccttcatcaagaaccaccccctgatggacgaggcggtt
ccctccgtcaaccaccggccctacttcacacgcacaaccagcaggttcaagttgacccag
ctagcagtggatacgtcagctgggccctataagaaccacacggtgctgttcctggggagc
gaggacggcagggtactaaagatcctggccagcacccatctcaacgcctccttcagcaca
cagctactggaggacatcgatgtctacaacccaaccaaatgtaatgtccgcggagaggac
cgacgggttctgggattggagctggacagggaacatcacgctctgttcgtggccttctcc
agctgtgtggtccgagtacctctgagccgctgcagtgactacggctcctgcaaggagagc
tgtctgtcctcgagggacccttactgcgtgtggcagaggacggggagctgtgctacggtg
gtgcccggattcaggggcggatttgagcaggatgtggagaacggctaccctcactaccca
gatagctgccacgacgtcctggcgaccacacgcaagcaaaacactcttgctgattctgca
tatgggaagaccacacccacaacaaccgccagcacaaccaatcaggtggccccattccca
aaggtggcaggtgactctgaaagaggtacaggtccagatggcggtcctccagtcccagtt
ggggaccaggggtcacctgactcggaaccaatcagtgtggagatggagggtgtccgacgt
cctcccgagatggagaagaccaaccacagtgtccactacaccctgctgatcgcctgtgtg
ctggtggcctttgtccttggagccttcctctcaggctttctggtctcctgctactgcaac
cacaccggcaacaagaccaagaggctggccaaggacccggaggcccccatccctcacgcc
ctgtccctacgcagcctggccaagctcaatggcctgctggacagccagaacaaggaggat
aagatggaggtgtcctcgcccaagctctacaactccttcttccagaacgggaaggagcat
cgtcaaggagcacccagacggaacggtggtcaccacccagggatgaccatgggagacctg
gtccacccccatcacctacaccactcttcggagctctctggtctgcccaccccagactcc
acccccgaactgcccatcaagaacatgaaggctttcaaaaaccagtgggagaagaaccag
aactgcaacaatgccaaggagcccaagtcccacaacatgggacaaggctccaggcccagc
tcaggcctgctccaccagcagatctacccctactctcacagcttctccaatgggcaagct
ctggccaatgggcatgccttggtcggtggaccccagcacctagaggaacgcaagatccac
aataccgagcgcatgttggtccagcagccttacccctgctacccgcagaaggtgatggag
gtcacatcgctggacgagctgctcaaacacatccacgaggccaactccagcaagaacacc
caggtcatgacttcatccggcctgtcagccagcggcgggtgccacgggggtcaactagct
tttgccaaccgcgtccagccgcacatcccagagacggagtcggcgccttactacagctcg
tccaccctgccccgagacagcctgacccgccgcatggacgtacctccggacatgccccct
caccaccagtccactctggaacggaggcactcttcccagagacactcactgattaccgct
gccactaagattgccaacggagggggtggtggagggatggtccaccgacagcaaagcttc
agccagcgtaacggccaccagcaccaaccgccccctatgctggctcgaatgaactccacc
ggcagcgcctgcgagatccactacccgctcatccccaatggttacctgacgcgccagcag
agctacaatggagagcaacaggaggataccggaggatacctccaccggggggccatagtc
cgccggaccacctccctcaaacccgacgtccctcccaaacccctcttcatccctgcctcc
tctcccgtcaaccaacagggaaacttcaactactga
DBGET
integrated database retrieval system