Salmo salar (Atlantic salmon): 106581042
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Entry
106581042 CDS
T04363
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106581042
Membrane trafficking [BR:
sasa04131
]
Protein recycling
Others
EARP complex
106581042
Endosome - Golgi transport
Tethering complex
GARP complex
106581042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Syndetin_C
PsaD
Sec8_N
Seryl_tRNA_N
NBD94
Motif
Other DBs
NCBI-GeneID:
106581042
NCBI-ProteinID:
XP_014018191
UniProt:
A0A1S3NSK2
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All DBs
Position
ssa20:complement(56365438..56396851)
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AA seq
830 aa
AA seq
DB search
MMEEEELEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRCLDDNIRTVVRGQTNVGQDGRQALEEAQVAISQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKVAQSELGTQILADFEEAFPAQGSKRAGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLTDGPGGKKPETPLESTNPFLEDEIGEDGSEMEEDLDRPKKHKAPDNPFHGIIS
KCFEPHLYVYIESQDKNLGEMIDRFVSDFRAQGPPKAGTEDGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIAFTTIFQKYLREYAWKILSGNLPKTSSNSGGLTIKSLLQEKEGSEAA
KFTVEELCLICSILSTAEYCLATTQQLEEKLKEKVDKTLVERINLTGEMDTFSNVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKY
FTQFCIKFTNSFIPKFINHLFRCKTISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADGNPETFQKTLDMKGLKRSE
QSSMLELFRQRLPTPPSGTDGGPSLSFSTPTPEQENSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaagaattggaatttgcggaggatttggaggctattttgcaccttact
ccagaggtgcagttggccatcgagcaggttttccccagtcaagacccattggacagagca
gattttaatgctgtggaatacatcaatacattgtttcctactgagcagtcactggctaat
atagatgatgtggtcaacaagatccgtctgaagattcggtgtctggatgacaacatcagg
acggtggtgaggggccagaccaatgtgggccaggatggcagacaggcacttgaggaggct
caggtagccatcagccagctctttggcaaaatcaaagacattaaggacaaggctgagaaa
tctgagcaaatggtcaaggagataacgcgggacatcaaacagctggaccatgctaagcgt
cacctgaccacctccatcaccaccctcaaccacctgcacatgctggccgggggcgtggac
tctttagaggcaatgacgaggaagaggcagtatggcgaggtggctaacctgctacagggt
gtagtcaacgtcctggagcacttccacaaatacatgggcatccctcaaatcagacagctc
tcagagagggtgaaagtggcccaaagcgagctggggactcagatcctggcagactttgaa
gaggccttccccgctcaggggtcaaagagagcagggggacccagtaacgttctgagggat
gcctgtctcgtggccaacgtcttggacccccgcatcaaacaggaaatcatcaagaagttc
attagacagcacctctctgagtacatggtgctcttccaggagaaccaggatgtagcttgg
ctggataagattgaccggcgctacgcctggattaagcgtcagctggtggactatgaggag
aagtacggacgcatgttccctgaagagtggtgtatgactgaacgcatcgctgtggagttc
tgccacatcaccaggacagagctggccaaagtgatgcggacgcgggccaaagagattgag
gtcaagctgcttctgtttgccattcagaggaccaccaacttcgaggggctgctcgccaag
cgcttctctgggtgcaccctcaccgacgggcccggggggaagaagccggagacaccactg
gagtccaccaaccctttcctggaggacgagattggagaggatgggtcagagatggaggag
gatctagataggcccaagaagcacaaggctcctgacaaccccttccatggcatcatttcc
aagtgcttcgagcctcacctctatgtctacatcgagtctcaggacaagaacctgggggag
atgattgaccgttttgtgtcagacttccgggcgcagggcccccccaaggccggcacggag
gacggtggagcggtgctgcccagctgtgctgacctgtttgtctactataagaagtgcatg
gtgcagtgctctcagctcagcacaggggaacctatgatcgccttcaccaccatcttccag
aagtacctcagagagtatgcctggaagatactgtctggaaacctgcccaagactagcagt
aacagtggaggactgaccatcaagagtctactgcaggagaaggagggttcggaggctgct
aagttcactgtagaggagctgtgtctcatctgtagcatcctcagtactgcagagtactgt
ctggccacaacacagcagttggaggagaagctgaaggagaaggtggataagaccctggtg
gagagaatcaacctgactggagagatggacaccttcagcaatgtgatctccaacagtatc
cagttgcttgttcaggacctggacgctgcctgtgaccctgctctcactgccatgagcaag
atgccatggcagagcgtagagcatgtaggtgaccagagtccctacgtgacgtcagtcatc
atgcacatcaaacagaacgtccccatcatcagagataacctggcctccacacgaaaatac
ttcacccagttctgcatcaagttcaccaactctttcattcctaaattcatcaaccacttg
ttcaggtgtaagactatcagcatggtgggggctgaacagctcctcctggacacccactcc
ctgaagacagtgttgttggatctgccctctatagggtctcaggtggtccgcaaggcccca
gccagctacaccaagatagtcgtgaaggggatgacccgcgctgagatgatcctcaaggtg
gtcatggccccccatgaaccctctgtggtgtttgtggataactacatcaagctcctcgct
gacgggaacccagagaccttccagaaaactctggatatgaaggggttgaagcgcagtgag
cagagcagcatgttggagctcttcagacagaggttacccactccaccctcagggactgac
ggaggcccctctctctccttcagtacccccacccccgagcaggagaactcgcgcatacgc
aaactggagaagctcatcaagaagagactctga
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