Salmo salar (Atlantic salmon): 106581182
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Entry
106581182 CDS
T04363
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A-like
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106581182
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106581182
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106581182
NCBI-ProteinID:
XP_014018537
UniProt:
A0A1S3NT07
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Position
ssa20:complement(58321164..58341162)
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AA seq
582 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPNGFGVKLENLQMSPPSSKI
NGNDSKPVFLTLTNGHSKGKLSGDEGSEDGDDFDTPPILKELQSLNTEEAAEQREEVDRI
LAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYV
RKQREVLRQFNQAVQGSDSNMTDKGGQDQVLFFFPEFNPPGQGMGQQGEEVGSEPSCKKM
RRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLV
TEVRVYNWFANRRKEEAFRQKLAMDAYPIPTHSMNPLLSHSHSSPHHHSSQISASPPSKM
QVRYSQQGPGEVSSSTTISHHGSMATSQSVLQQVSPGSLDPSHSLLSPDAKMMSASGGGL
PPVSTLTNIHSSHHTHQQTQNLIMPLSGVMTIAQSLNTSQSQSVPVINSVAGSLAALQPV
QFSQQLHSPHQHGLMQQSPSHMNQQPFMATVTHSHSQYLPLMYPHKQEPPQYSHQSRFPS
AMVVTDANSLSTLSSMSSSKQDSTVNKMVQLGGLSWCPLQAW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgaaaatggtgtccaagttgacatctctccaacaggagctcttgagcgccttg
ttagattccggagttaccaaagatgttctgatccaagcgttggacgatatggaccctagc
ccgaatggctttggagttaaattggagaatctacagatgtctccgccaagttctaaaatc
aacggaaatgattcgaagccggtatttcttacgttgaccaatgggcacagtaagggcaaa
ctgtcgggagatgaggggtccgaggacggggacgatttcgataccccacctatactgaaa
gaactccagtcacttaacaccgaggaagcagcggaacagagggaagaagttgaccgaata
ttagctgaggacccctggcgtgccgctcgcatgatcaaaggctacatgcaacagcacaac
ataccacaacgtgaggtggtggatgtaaccgggctaaatcagtctcacctctcacagcac
ctcaacaaaggcacgcccatgaaaactcagaagcgagcggcgctctacacctggtatgtc
aggaaacagcgggaagttctcagacaattcaaccaggcagtgcaaggttctgacagcaat
atgaccgacaaaggcggtcaggatcaggtgctgtttttcttcccagagttcaaccctccg
ggtcagggcatggggcagcaaggggaggaggtgggctctgaaccctcctgcaagaaaatg
agacggaaccgttttaaatgggggcctgcatcccaacagatcctctaccaggcctatgaa
agacagaagaaccccagcaaggaggagcgggaggcgctggtggaggagtgcaacagggct
gagtgtcttcagagaggggtgtctccgtctaaagcgcatgggctgggctctaacctggtc
actgaggtacgggtctataactggtttgccaaccgtcgtaaggaggaggccttccgtcag
aagctggcgatggatgcctaccccatacccacccacagcatgaaccctctcctgtctcac
agccacagctccccacaccaccacagctcccagatcagcgcatccccccctagtaagatg
caagtgcggtacagccaacagggacccggtgaggtcagctcctcgacgaccatcagtcac
cacggcagcatggcgaccagccagtcggtgttacagcaggtgtctccgggcagcttggac
cccagccacagtctgctgtcacctgacgccaagatgatgtctgcgtcaggtggaggtctg
ccacctgtgagcacgctgaccaacatccacagctcccaccacacacaccagcagacacag
aacctcatcatgcctctctctggagtcatgaccatcgcacagagtctgaacacgtcgcag
tcccagtcagtgccggtgatcaacagcgtggcagggagccttgcagcgctgcagccggtg
cagttctcccagcagctccacagtccccaccagcatggcctgatgcagcagtcccccagc
cacatgaaccagcagcccttcatggccaccgtgactcattcacacagtcagtacctgcct
cttatgtaccctcataagcaggagccaccgcagtattcccaccagtcacggtttccctca
gccatggttgtgacagacgccaacagcctcagtactcttagctccatgtcatccagcaaa
caggattctaccgtaaacaagatggtgcaactggggggtctctcctggtgtcctcttcaa
gcctggtga
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