Salmo salar (Atlantic salmon): 106581405
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Entry
106581405 CDS
T04363
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106581405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106581405
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
106581405
Endosome - Golgi transport
Arf GTPase associated proteins
106581405
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
106581405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
SAM_1
PH_11
SAM_2
PH_6
PH_13
PH_8
PH_9
Motif
Other DBs
NCBI-GeneID:
106581405
NCBI-ProteinID:
XP_014018927
UniProt:
A0A1S3NU46
LinkDB
All DBs
Position
ssa20:complement(74588987..74696942)
Genome browser
AA seq
1722 aa
AA seq
DB search
MSEAEGCVSVWEWLCVLHLDQYFPVFQDAGFGTLLECQGLTQDQLETIGITLPGHRKRIL
ASLQKTLHTNTHTHPEREHDALHTHLAAEGDQRGEERAVFTDRPSPVGSERPVPAQRPVS
REGERDGERPRPVPKERPVSRGERPVPKERPVSRGERPVPKERPVSRGERPVPKERPVSR
GERPVPKERPVSRGERPVPKERPVSRGERPVPAQRPVSREGERDGERPVPAQRPVPKERT
KYRSVPVETLDCVQTYPRPNTTPCPTTLHSTAQDSPLPPIPPRSTPNCPPLRFIPTSPKH
SPTAPKPRSEHINLNTPTTVPSASLTTNPLTLPSPRPCPAPLAIYPPARHPQQVWEGGRK
PSPGSPSSSSSSSSSFERYDQSSSDQGVPPLPPKVYVVGAGPKEPHSPAPIPHRPPVLPS
RTTPTQSDAPVDEPHTDRTPPPPPRTRVPNTPVDTQPALPMRRIPQPPPEIRSGDSSDDY
EDPDQVFPKPQAVNVAEDPDQVYSKPQAVNVAEGPDQVYSKLQAVNMADRDVFLPVPGWG
KGRYNSLCSDDELLDDDNEPISSHRSSWQDYGLSTLQGSVYLPVRGRVLAPPPRDGPSPE
PCPVLKIGWLDKNPTQGSLYYQRRWVKLDVDYLRYFDNDKEVYSKRIIPTAAITGVTNVG
EQKFEVVTANRTFLFKAESDSERNEWVAVLQNFTRGRQEGSREMTSFLTPGSPLTPEQQG
YLELRGLRSKLYTVVSGDKVFLYKNMEDYRLGIGITSIDMNVGNVKDTDRRSFDLTTPYR
IFSFLADSEQHKEQWVEAMRDAIGDALSNSEVANQIWAEPSNGCCADCGVAKPEWAAINL
CVVVCKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLGNERLNRFWAANIPPSE
VLSPTSCSEDRRRFISSKYRHGKYRKYHPLYGNQRELNNALCINVQCSDVLETLCLVFCG
ADVNCSTGQADCPSPLSLALTHNQKLQAEFLSHNLNTELPRSEVTGVMEPQHYSPQHPVT
HNGFLFKTASMVRPITERKAREEFSRRWCMLNDGNFSYYESDKTSTPNGALKSTEIVCLF
VNTPERHGYDHTFELYSDSERVYLFGTDDQDSHKEWVKSITKMFIPSNAEALLRLSFERI
GRLKYKDGLNLQSPRVGWFALVGSSLHAYLEDSEEEEEIHLRKLQELSIQQENEVLVLVE
RGRTLYIEGDRKLDFQGWCVGIQKAAGSAGDSLSQQQLTETDIPVIVDRCIDYITQCGLT
SEGIYRKSGVNSRVAALCEAFRRDARSVRLKEEEHQVDDVSNTLKRFFRESGEGLFTIQA
ASAWLSTPVVPEESKKISQYQLLLSRLPRVNKATLRALVNHLYCVQRFAELNQMNLHNLA
IVFGPTLFQTDGKDYTAGRVVEELIEHYTDVFEVDEQQLKRQLDEITVIIKVREKLNLNS
SVPASGSAGDFICTVYLEEKKETTEQHVKIPGSMTAAELTCEILDRRKIQVREKDYWSCW
EVSQKEEIERPLHHLERVLPILHSLGTDSHLLVKKHLAMEAILVYLASKVDVSKHGMVKF
REERSILGLGLNTGSFHDRYFILNTVSLRMYKEVRSNRPEREWQVKNLRVYLGIKKKLRP
PTCWGLTVIYKSEKQEKPEKQQWYLCCDTQTEMREWFSTFLTIQYDGNVWPADAVQTRVT
RALPVDTRHGNVALIPLRGSENEMRNSVAAFTADPLGLFRDV
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcggagggctgtgtgtcggtgtgggagtggctgtgtgtgctgcatctggac
cagtatttcccagtgttccaagacgcagggtttggaacgttgttggaatgccaagggctg
acccaggatcagctggagacgattggaatcacattgcctggacaccgcaaacgcatccta
gccagcctgcaaaaaacactccacacaaacactcacacacacccagagagagagcacgat
gctctacacacacacctggctgcagagggagaccagagaggggaagagagagcagtgttc
acagacagacccagccctgtggggagtgagagaccagtccctgcacagagaccagtgtcc
agggaaggagagagggatggagagagaccgagaccagtccctaaggagagaccagtgtcc
agaggagagagaccagtccctaaggagagaccagtgtccagaggagagagaccagtccct
aaggagagaccagtgtccagaggagagagaccagtccctaaggagagaccagtgtccaga
ggagagagaccagtccctaaggagagaccagtgtccagaggagagagaccagtccctaag
gagagaccagtgtccagaggagagagaccagtccctgcacagagaccagtgtccagagaa
ggagagagggatggagagagaccagtccctgcacagagaccagttcctaaggagaggaca
aagtaccgctctgtccctgtagagacattggactgtgtccagacttaccctcgtcccaac
actaccccctgtcctaccaccctccattctactgcccaggactcccctttaccccccatc
ccacctcgcagcaccccaaactgccccccactacgcttcatccccacctcccctaaacac
tcccccacggcacccaaacccagatctgaacatattaacttaaacaccccaaccactgta
ccttctgctagcctcaccaccaatcccctcaccttaccctcccccaggccctgtcctgca
cctctggctatctacccaccagccagacacccccagcaggtgtgggagggaggaagaaag
ccctcccctggttccccctcttcctcatcctcctcttcctcctcatttgaacgatatgac
cagtcatcatctgatcaaggcgtgcctcccctcccccctaaagtctacgtggtgggggcg
ggccctaaagagcctcacagccctgctccaatcccacatcgacctcctgtcttgccctcc
agaaccacacccacacagagcgatgctcccgtcgatgagccgcacacagaccgaactcca
ccacccccgcctcggaccagggtacccaacacgccagtcgacacgcagcctgctctgccc
atgagaaggatcccccaaccaccgcctgaaatcaggtcaggtgacagttcagatgactat
gaagatccagaccaagtcttccccaagccccaggctgtgaatgtggcagaagatccagac
caagtctactccaagccccaggctgtgaatgtggcagaaggtccagaccaagtctactcc
aagctccaggctgtgaacatggcagacagagatgtgttcctgccagtgccggggtggggg
aagggacggtacaactctctctgcagcgacgatgaactattggacgatgacaacgagcca
atcagcagccatcggagctcgtggcaggactatggtctgagtacgctccagggtagtgtc
tacctgccggtcagaggcagggtcctagccccgccccctagagatggcccctcccctgaa
ccctgccctgttctaaagattggctggctggataagaacccaacccaggggtctctgtac
taccagaggagatgggtgaagctggatgttgactacctgagatactttgacaacgacaag
gaggtgtactctaagaggatcataccaacggctgccattacgggggtgaccaacgtgggg
gagcagaagtttgaggtggtcacagccaaccggacctttctcttcaaagccgagagcgac
tctgagaggaatgagtgggtggcagtgctgcagaacttcactagggggcgccaggaaggc
agcagggagatgacctcctttctgacccctggttcacccctgacccctgaacagcagggc
tacctggagctgaggggcctgcgctccaaactctacacggtcgtctccggagacaaggtc
ttcctctacaagaacatggaggactaccgccttggcatcggcatcacgtccatcgatatg
aacgtaggaaacgtgaaagacactgaccgccgcagctttgatctgacaacaccctaccgc
atcttcagttttctagcggattcggaacaacataaggagcagtgggtagaagcgatgcgt
gacgcgattggagatgctctgtccaatagcgaggtggctaatcaaatctgggcggagcct
agcaacggttgctgtgccgactgtggcgttgccaaacctgagtgggctgccatcaacctg
tgtgtggtggtctgcaaacgctgtgcaggagagcatcggggtttgggccccagcatctct
aaggtgcgcagtctgaagatggacaggaaggtgtggacagaggagcttatacaggtgttc
ctgttgctaggaaacgagcgtctgaacaggttctgggcggcgaacatccctcccagcgag
gtgctgagtccgaccagctgcagcgaagaccgccgacgattcatcagctccaaatataga
catggcaaataccgcaaatatcaccccctctacggcaaccagagagagctcaacaatgcc
ctgtgtataaacgtgcagtgcagtgatgtgctggagaccttatgtctggtgttctgtgga
gctgatgtaaactgttctactggccaggctgactgtccctcccccctctccctggcactc
acacacaaccagaaactacaggccgagttcctctcacacaacctcaacacagagctgcct
cggtcagaggtgactggggtcatggagcctcaacactattcaccacagcaccccgtcact
cacaatggcttccttttcaagaccgcctccatggtccggcctatcacggagcgcaaggcc
agggaggagttcagtcgtcgctggtgtatgttaaatgatgggaactttagttactacgag
agtgacaagacctccacgcccaacggtgccctgaagtctacagagatagtctgtctgttt
gtcaacacaccagagagacatggctatgaccacacgtttgagctgtactctgactcagag
cgtgtctatctgtttggaactgacgaccaagacagccacaaggagtgggtcaaatccatc
accaagatgtttattccgtccaatgcagaggctctgttgagactgagctttgagcggatt
ggccggctgaaatacaaggacggcttgaacctacagagccctcgggttggctggttcgcg
cttgttggctcctccctccatgcctacctggaggacagtgaggaagaggaggagatacac
ctacgcaaactacaggagctctcgatccagcaggagaatgaggtgctggttctggtggag
agaggcaggactctgtacatcgagggggacaggaagcttgacttccagggttggtgtgtg
ggcatccagaaagcagcaggcagtgcaggagactctcttagtcagcagcaactaactgag
actgacatccctgttatagtggaccgctgcattgactatatcacacagtgcggtctgacg
tctgagggtatctaccgtaagagtggcgtgaacagtcgcgtggcggcgctgtgcgaggcg
tttcggcgtgatgctcgtagcgtgcgtctgaaggaggaggagcaccaggtggacgacgtg
tctaacacactgaaacgcttcttcagagagtctggagagggactgttcaccatacaggct
gctagcgcatggctcagcacacctgtggtcccagaggagagcaagaagatctctcagtac
cagctgctgctgagccgcctgcccagagtcaacaaggccacgctacgagccctggtcaac
cacctctactgtgtgcagcggtttgcagagctgaaccagatgaatctccataacctggct
atagtatttggcccaacactgttccagaccgacgggaaggactacacagctggccgcgtc
gtagaggaactcatagagcactacactgacgtttttgaggtggatgagcagcagctgaaa
aggcagctggatgagatcacggtcatcattaaagtccgagagaagttgaacctcaactcc
agcgttcctgcgtcggggtcagcaggtgacttcatttgtacagtgtacctggaggagaag
aaggagacgacagagcagcatgtcaagatccctggttctatgacggcagcagagctgacc
tgtgagattctggaccgacggaagatccaggtcagagagaaagactactggagctgctgg
gaggtcagccagaaggaggagatcgagcgtccattgcatcatctggagcgtgtgttaccc
atcctacactctctgggtaccgactcccacctgctggtcaaaaaacacctggccatggag
gccatactcgtctacctggccagtaaagtggatgtgtccaagcacgggatggtgaagttc
cgggaagagaggagcattctgggattgggactaaacaccggcagcttccacgaccgctac
ttcatcctaaacactgtctccctcaggatgtacaaggaagtgcggagtaatcgtccagag
agggagtggcaggtgaagaacctgagggtctatctaggcatcaagaagaaacttcgacca
cccacctgttggggtctgactgtgatctataaaagtgaaaaacaggagaagccagagaag
cagcaatggtatctgtgttgtgacactcagacagagatgagggagtggttctccaccttc
ctcactatccagtatgatggtaacgtttggccagcggatgcagtacaaacacgtgtgacc
cgtgcgttgccggtggatacgcgtcatggtaacgtggcattgattccgttgcgtggcagc
gagaatgagatgcggaacagcgttgcagctttcaccgccgacccgcttggcctctttaga
gatgtctga
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integrated database retrieval system
