Salmo salar (Atlantic salmon): 106581463
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Entry
106581463 CDS
T04363
Symbol
dhx36
Name
(RefSeq) DEAH-box helicase 36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106581463 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106581463 (dhx36)
03012 Translation factors [BR:
sasa03012
]
106581463 (dhx36)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106581463 (dhx36)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106581463 (dhx36)
Translation factors [BR:
sasa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106581463 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
DUF1765
DUF7428
Motif
Other DBs
NCBI-GeneID:
106581463
NCBI-ProteinID:
XP_014019007
UniProt:
A0A1S3NUC6
LinkDB
All DBs
Position
ssa20:78019966..78054361
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AA seq
764 aa
AA seq
DB search
MLKLERRKAPKSYWPAVITCIDKYISCNNLYSIVYSFSFVFLHFSRLPRKQGSVLYCTTG
IILQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAEK
FSKYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYRPQRKEQRPRWKRGFMQGQNSRPEKD
QKEAEYKESWPCYARTIRDKYSDRTIDVLEMMDDDDKIDLELIVQLIRHIVLSQEEGAIL
VFLPGWDNISGLNDLLMAQQMFKSDRFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATN
IAETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKCY
HLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAVTLAIT
HLMDLNALDRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFF
IPMGKEKMADFRRRTLSRDSKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTLQ
MLHNMKGQFAEHLLGAGFISTKNHKDPDSNINSENEKLIKAVIVAGLYPKVAMIKPSGSK
KRPVRVYTKTDGKVCIHPKSVNAEETQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFF
GGDVTIQMDQDQETIAVDDWIVFQSPARIAHLVKNLKKELDSLLEEKIRSPAPVDWSNRQ
SKDCAVITAIIDLITTQERPNINARNTAPRGRHQYYNNDDGDEY
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaactggaacgcagaaaggcgcctaaaagttactggcccgctgtaataacctgt
attgataagtatataagctgtaataacctgtattcaattgtgtattctttttcatttgtt
tttcttcattttagtcggttaccacggaaacagggctcggtgctgtattgtacaactggt
attattctacagtggctccgctcatcccctctgttgtccaccattagccacctggttttg
gatgagattcatgagaggaaccttcactctgatgttctgctcatcatcgttaaagacctg
ctccgagtccgacaggacctcaaggtcatcctcatgagtgccacgctcaacgctgagaag
ttctccaaatactttaataactgtcctatgatccacatcccggggatgaccttcccagtg
caagagttcctactggaggatgtattggagatgattaggtaccgtccccagaggaaggag
cagaggcccaggtggaagagaggtttcatgcagggtcagaactccagaccggagaaggac
cagaaagaggccgagtacaaggagagctggccctgctacgcccgcacaatacgagacaag
tactctgacagaaccatagatgtgttggagatgatggacgatgatgataagattgacctt
gagctcatcgtgcagctgatcagacatatcgtgctaagccaagaagaaggagccatcttg
gtgttcctgccaggttgggacaacatcagtggcctcaacgacctcctcatggctcagcag
atgttcaaatcagatcggtttgtgatcattcctctgcactccctgatgcctactgtcacc
cagacctcggtgttcaaaaggccccctccaggagtcaggaagattgtcattgccaccaat
atcgctgagaccagtattaccatagatgatgtggtgtttgtgatagatgggggaaagatt
aaggagactcactttgacactcagaacaacatcagcactatgactgcagagtgggtcagc
ctggccaatgccaaacagagaagaggacgcgccggcagggtgtgtccagggaagtgttat
cacctgtataatggcctgagggccagtcttctggatgcctaccagttacctgagatcatg
cgcacgccactggaggaactgtgtctgcagatcaagatcctcaagctgggtccaatagca
gagttcttgaggaaagctctggaccctcccacagaggaggctgtcactctggccatcaca
cacctgatggacctcaatgctctggaccgctcagaggctctgaccccgttagggttccac
ctggccaggctgcctgtagagcctcacatcgggaagctgattctgtttggagctctgctg
ggctgtctggaccctgtcctcactatcgccgcctctctcagcttcaaggaccccttcttc
ataccaatgggtaaggagaagatggcagactttaggagaagaactctgtccagagactca
aagagtgaccacctcaccatcatctatgccttcacaggctgggaggaagctaagcgacgc
ggctacaagtttgaacgagagttctgctgggacaacttcctgtcagccaatacactccag
atgctgcacaacatgaagggtcagtttgctgagcacctgctgggggctggcttcatcagc
accaagaaccacaaagaccctgactctaacatcaactcagagaatgagaagctgatcaag
gcagtgatagtggcaggtctctaccccaaagtggccatgatcaaacccagcggcagcaag
aaaagaccggttagggtgtatactaaaactgatgggaaggtgtgtattcaccccaagtca
gtgaatgctgaggagacccagtttaactacacatggctcatctatcacctcaagatgagg
accagcagtatcttcctgtacgactgtacggaggtgtctccgttctccctactgttcttt
ggaggtgacgtcaccatccagatggaccaggaccaggagaccatcgctgtggatgactgg
atcgtcttccagtcccccgcacgcatcgctcacctcgtcaagaatctgaagaaggagctg
gactctcttttggaagagaagatccgaagccccgcccctgtggactggagcaaccgccaa
tccaaagactgtgctgtcatcacagccatcatagacctcatcaccacccaggagaggccc
aacattaacgcgaggaacactgcccctagaggacgtcaccagtattacaacaacgatgat
ggtgacgagtactag
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