Salmo salar (Atlantic salmon): 106581524
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Entry
106581524 CDS
T04363
Name
(RefSeq) splicing factor, arginine/serine-rich 15-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106581524
03041 Spliceosome [BR:
sasa03041
]
106581524
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106581524
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
106581524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106581524
NCBI-ProteinID:
XP_014019102
UniProt:
A0A1S3NUM0
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Position
ssa20:80278017..80290138
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AA seq
889 aa
AA seq
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MDSVNAFNLELFSMIDMNPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVYGPRFQKNFTPTFQNLYLCPHDDKSKIIRVLNLWQKN
AVFEMDIVQPLLDMAAGSLVHAPSPQEDLQAQPQVPSSSIAAVHTPVSSSSIAEALPQVS
SASIAAALPQLPPQLQNPEALAAVAQLFQSGQGHELQKILQRFQPGQQTPPMVHNTVADQ
NHSQMVQGQHNTHHPLLNTHQTHPTEQKNSLAKKLLDRFDYDDEPEEVKREEMNPLVPGN
QYDGHFPGQMQPNVEQPFQGQPGRQQTPGGGYPGLNKGYSQSQHTDQGNSREREDPSGRR
EGRQRGHGRRSRSRSGSRSPRRKRSRSGSPSRKPRHSSQRSGSRSRESRWNSPRSRSQER
KEREKDKDRRQKGLPSIKSQTLSVCTTTLWVGQLDKKTSQQDVMCLLEEFGQIDSINMIP
PRGCAYIVMVHRQDAYRALHKLGRGSFKVNQKAIKIAWALNKGIKAELKQYWDVELGVTF
IPWSKIRQDQIEDIREGGTLDPDTLDPEWRSVQNNQETPEEFRQNGRSEPLATVEDTAGT
APVATPVHPVQVQSMGGVGSLQQHPSFPPGPPGGPPMGLPPPSFPPGVPPGPPPSFMRPG
PRFNPMQMMPPGFLPPGSMPLGPSGPPPSAAGGVGVVELSLDPAGLGNQVPGPPGGSPGG
PIPLSGGLLGARPGMIPLQRPPVHSPGPVLPPPHMQRFPPPHGGPHGPHPPRGPPHHNMP
PQMMPPNRGPHPHMMHHDGPPPPPGGPRGFGMGMPPSHPMRGPFPPHGPLPGGPPPPFMR
GGPRGPDGPEEIEGRGPFRGERPGFRDRDPDRERERDWERERETMRERD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcaacgctttcaacttggagttattctccatgattgacatgaatcctcca
atatcacgagcaaagatgatgtcagtcactaaatcggcaataaaggctatcaagctatac
aagcatgttgtccagattgtggagaagttcatcaagaagtgtaagccagaactgaaggtt
cctggtctatacgtggtggattccatcgtccgacagtcccgacatcagtttggagtggat
aaggacgtctatggacccaggttccaaaaaaacttcaccccgactttccagaacctctac
ctctgtccacacgatgacaagagtaagatcatccgtgttctcaacctgtggcagaagaac
gctgtatttgagatggacatcgtccagcccctgttggacatggctgctggctccttagtc
catgctccctccccccaggaggacctccaggcccagccccaggtgcccagttcttccata
gctgcagtccacaccccggtctccagttcttccatagcagaagccctgccccaagtctcc
agtgcctccatagcagcagccctgccccagctccccccacagctccagaaccctgaggcc
ctggctgctgtggcacagcttttccagtctggacagggacacgagcttcagaagatcctc
cagaggttccagccagggcaacagactccacctatggttcacaacaccgtggctgaccag
aaccactcacagatggtccaaggccagcataatacacaccatccactgttgaacacacac
cagacacatcctacggagcagaagaattcactagctaagaaactcctggaccgttttgat
tatgacgacgaaccagaagaagtaaagagagaggagatgaatccccttgttccagggaac
cagtacgacggccattttcctggtcagatgcagcccaacgtggagcaaccgtttcagggc
cagcctgggagacagcagacacctggtggaggataccctggtctgaacaagggctacagc
cagagccagcacactgaccagggaaactccagagaaagagaagatccgtctgggaggagg
gaggggaggcagcgtggtcacggcaggaggtcacgctccaggtctggctctcgttctccc
aggagaaagaggtccaggtctggttctccctcccggaagccccgacactcttcacagcgc
tctgggtcccgctccagggaaagtcgctggaactcccctcgctcccgctcgcaggagagg
aaggagagagagaaggacaaagaccgtagacagaaaggtctgcccagcatcaagagccag
acgctcagtgtttgcaccacgactctgtgggtgggccagctagacaagaagacttctcag
caggacgtcatgtgtttactagaggagtttggtcagatagactccatcaatatgatacct
cctcggggctgtgcctacatagtgatggttcacaggcaggatgcctacagagctctacac
aaactcggcagaggatccttcaaggtcaaccagaaagccatcaagattgcgtgggcattg
aataaaggtatcaaggcagagttgaagcagtactgggatgtggagctcggcgttaccttc
atcccctggtctaagatacgacaggaccagatagaggacatcagagaaggagggacgctg
gacccagacacactggacccagagtggaggagtgttcagaacaaccaggagacaccagag
gagttcagacaaaatggccgctctgagccgttagccacggtggaggacacagctgggacc
gcacctgtagccactccggtacatccggtacaggtacagtccatgggaggtgtaggttct
ctccagcagcacccctccttcccccctggccctcctggtggtccccccatgggcctgcct
cccccttccttcccccctggtgtcccacccggacctcctccgtccttcatgagaccgggg
ccaaggttcaaccccatgcagatgatgccaccaggtttccttccgcctgggtcgatgccc
ctgggcccctctggcccccctccctcagcagcaggaggtgtaggggtagttgagctttct
ctggatccagccggcctgggtaaccaggtgcctggtcctccagggggctcaccaggcggt
cccatcccactgtctggaggtcttcttggggctcgccccggcatgatccccctccagcgc
cccccagtccactctcctggtccggtcctccccccacctcacatgcagcgcttccctcct
ccccacggtggcccacatggcccccacccccctcggggccccccccaccacaacatgcca
ccccagatgatgccccccaacaggggcccccaccctcacatgatgcaccacgatggccct
cctccgccgcccgggggcccacgggggtttgggatgggcatgcccccttcccatcccatg
aggggtcccttccctccccacgggcccctccctggggggcccccaccacccttcatgagg
gggggccctcgagggccagatgggccggaggagattgaggggagggggcccttcaggggg
gagagacctgggtttagggacagagatccagacagggagagagagagggactgggagagg
gagagagagactatgagagagagggactag
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