Salmo salar (Atlantic salmon): 106581528
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Entry
106581528 CDS
T04363
Symbol
tnfaip1
Name
(RefSeq) TNF alpha induced protein 1
KO
K15074
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106581528 (tnfaip1)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
106581528 (tnfaip1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB_2
BTB
Consortin_C
Motif
Other DBs
NCBI-GeneID:
106581528
NCBI-ProteinID:
XP_014019111
UniProt:
A0A1S3NV37
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Position
ssa20:80555032..80566469
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AA seq
410 aa
AA seq
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MICLSSERLWRPPPVAVTTAGDIRTSICRVVIYLQRDMSGDSCQLPLHRLCLQTQVTSTG
SQAISTGSQAISTGSQAISTGSQVTSTGSQAIRPSHEASQMACPKSKTCSYRAALGLGNK
YVRLNVGGTLFYTTLQVLTRQDSMLKAMFSGRKEVFIDREGWILIDRSGKHFGSILTYLR
EEAVSLPPGRQGALELLAEAKYYLIQGLVELCQGGLQDQKEPSLCVIPVVTSAKEEDRLI
QACTKPVVKLLYNRSNNKYSYTSNSDDNLLKNIELLDKLSLSYNGRVLFIKDVIGDEICC
WSFYGQGRKLAEVCCTSIVYATEKKQTKVEFPEARIYEETLNALLYETLPVPDDSLLEAT
RRRHAHSHTHCGFHSEEEEGPTHSGVDLRERVRRIHVKRYSTYDDWPLGH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcctgtccagtgaaaggctgtggcggccccccccagtggctgtcaccacggcg
ggggacatcaggacctccatctgcagggtggtcatctaccttcagagggacatgtccggg
gacagctgccagctcccgctgcaccggctatgcctccagacccaggtcacgtccacaggc
tcccaggccatctccactggctcccaggccatctccactggctcccaggccatctccact
ggctcccaggtcacgtccactggctcccaggccattagaccttcccatgaagcctcccag
atggcgtgtcccaagtccaagacgtgcagctacagagcagcgttgggcctgggtaacaag
tatgtgcgtctaaacgtaggggggaccctgttctacaccacgctgcaggtgctcaccagg
caggactccatgctgaaggccatgttcagtggcaggaaggaggtcttcattgacagagaa
ggctggatcctgatagatcgcagtgggaagcactttggctccatcctgacgtacctgcgg
gaggaagcggtctccttgccccctggcaggcagggggctctagagctgctggcagaggcc
aagtattatctcatccaaggtctggtggagctgtgccagggaggcctgcaggaccagaag
gagccgtctctgtgtgtaatccctgttgtcacctctgccaaggaggaagatagactgatc
caggcctgcaccaagcctgtcgtgaagctgctgtacaacagaagcaacaacaagtactcc
tatactagtaactcagacgacaacctgttgaagaatattgagctgcttgacaagctgtct
ctgagctacaacggccgtgttctcttcatcaaggacgtgatcggtgatgagatctgttgc
tggtcgttctacggacagggacgcaagctggcagaggtctgctgcacatccatagtttac
gccacagagaaaaaacagaccaaggtggagttcccagaggccaggatctacgaggagacc
ctgaacgctttgctctatgagacacttcctgtccctgacgactccctattggaggccaca
cgccgtcgacacgcccacagtcacacccactgtggtttccacagcgaggaggaagaaggc
cccacccactctggggtggaccttagggagcgcgtgcgccgcatccacgtcaagaggtac
agcacctacgacgactggccgctgggacactaa
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