Salmo salar (Atlantic salmon): 106581618
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Entry
106581618 CDS
T04363
Symbol
lmo7
Name
(RefSeq) LIM domain 7
KO
K06084
F-box protein 20
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
106581618 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106581618 (lmo7)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106581618 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
106581618
NCBI-ProteinID:
XP_014019225
UniProt:
A0A1S3NVF8
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All DBs
Position
ssa21:complement(833594..950975)
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AA seq
1327 aa
AA seq
DB search
MSSSGSDAETDSVFRMAADSNKDSLHYRRSLVIEPKTTTQFNQFLPTKDKPAAYVPAPLR
KKRAERHEDSRRSWASPMYTEEDGTFTRLLQKRAVANDGSKSMTDLAVDQAALKQVCYEE
LQKIREQVKENEDQWQDDLTKWKNRRKSVNSDIVKKKEEREQIEQTTASSGGGSGGFLRS
NRSSIGSRLNSLASLDQDVFEDSAPVLQTRTLPPRSYTIDYTYTPVDRPSHTPPSVPHPR
EEDPAPTATMATDRAYSPSRGDMSNSSDRPSGSGSDITNNTTTIGRTSNYNRYVPAPTPS
ERAPTPSERAPTPSERAPTPSERAPRGAPTLSERAPRGAPTPSESAPTPSERAPSPALRY
TSAAKTEETSSTTTVTTPSFLPKLPEPRRPWAGKVAEEVTTSTAGGSLYKLQPQYNSVAM
EPKPMPPSVSRVSASLPRSYMKSDSALLTSVVTPRPFGSQSTCIASLPRAYTKNGEMDVT
KKSSVPSRYSQVMTSEDESRSHSNSANSSGGEEEEEEEEEKRERVRGVNPTLAPTLAPSP
VPSQARSPFTALQPPKVASPALVSLVRAKDTNQESYSDMRISLNQKPNSSRDFGFQTEWD
STGAHVTSIQPGSPAELCQLQVGDEVLAVSGHRVAEMSYGEWKSSTEQALQQGSLTMDIR
RHGRNNWDRDLPSLPCKSHKTINLTSMNHHPTLIGSSNTATVNSTTSLAFTSQGSIETTK
EIAIQQIIDVASIGVNGGFHDETVTMRNKESVEPISLKNLKRRSEFFEQGGSDSAISDMP
VPSIAPSSNHWSWDLEEERRRQEKWQKEQERLLQEKYSRDQEKLEEEWRRAQQDAVTEGG
RHHQEEPSSKSISLLCPLRQPILPWEDQEEERRRRRKEEEEAQRRQEEEKRKVEEEQRWQ
EERMRTEERDLLRLQKERKREKQKEEERRQRKEEELRWQRRKEEEREDERKHQEAANQQH
MENARMQEQQQWVGDSCGYAKVRPEISMADRAKSKSTPELDDVEKPENKMSVNTLCPGWY
GRSGGMAQKLLEEELRRKADKNDQSLRAASELELERRNILNAMRYREPERVTSSGGLGEA
SWRNGQQSLSQAELERQQILQEMKKKTQLATDNSWIRQRTTTSKDPAASLISRGESLDNL
DTAPRSSWRSSWSTSSIPNYSSPHSALSSLNTTSSHGDGGYGGGGYSGSGVGGRPGSATL
PFSLSMSSLRGAGGSNPSPWSQCSPSPSPSPTTSPGLEPESRPSSQQRSRSVSGKKICTF
CETALGKGAAMIIESLGLCYHLTCFKCIDCKSDLGGSEAGAEVRIRNRQLYCNSCYMRFK
TGQPTSM
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttctgggagtgacgcagagacggactcagtcttcaggatggcggcagacagt
aacaaggattcactgcactaccgccgctcgctggtcatcgagcctaaaacgaccacgcag
ttcaaccagttcctgcccaccaaggacaagccagcggcctatgtgccagcgccgctccgc
aagaagcgggccgagcgccatgaggacagccgccggagctgggccagccccatgtacacg
gaggaagatggcaccttcaccagactgctccaaaagcgcgcagttgctaacgacgggagc
aaatcaatgacagaccttgcagtggaccaggcagccctgaagcaagtatgctacgaggaa
ctacagaagatcagagagcaggtcaaggagaacgaggaccagtggcaggatgacctcacc
aagtggaaaaaccgtcgcaagagcgtcaactctgatattgtgaagaagaaagaggagagg
gagcagattgagcagaccacagcgagcagcggaggagggagcggtggtttcctgaggtcc
aaccggagctccatcggcagtcgtctcaactccctcgcctccctggaccaggacgtgttt
gaagactccgctccggtcctccaaacccgtaccctcccccccaggagctacaccatcgac
tatacctacacgcccgttgaccgccccagtcacacacccccctccgtgccccacccgaga
gaggaggaccccgcccccactgccaccatggcaactgacagggcctactcgccctccagg
ggtgacatgagcaacagtagtgaccgtccctccggttcaggtagcgacatcacaaacaac
actaccaccatcggtcgtacctcaaactacaaccgctacgttccagccccgaccccctcg
gagagagccccgaccccttcggagagagccccgaccccttcggagagagccccgaccccc
tcggagagagccccaaggggagccccgaccctctcggagagagccccgaggggagcccca
accccctcggagagtgccccgaccccctcggagagagccccaagcccggccttgcggtac
accagtgcagccaagacggaggagacctccagcaccaccaccgtcaccacccccagcttc
ctcccaaaactacctgagcccaggcgcccgtgggcgggcaaggtggctgaagaagtgacc
acttccactgctggtggttctctgtacaaactacaaccacagtacaactcggtggcgatg
gagccaaagcctatgcctcccagtgtgtctcgggtttctgcctctctccccaggagctac
atgaaatcggatagtgctctcctcacctctgtcgtcacgccacggcctttcgggagccag
tccacctgcatcgcatcgctgccccgcgcctacaccaaaaacggcgagatggatgtcacc
aagaagtcgtccgtccccagccgctatagccaggtcatgacctccgaggacgagtcacgt
tcccactccaactctgccaacagcagtggaggagaggaagaggaggaggaagaagaagaa
aagagagagagggtacggggagtgaaccccacactggcccctaccctggccccctctcct
gtcccttctcaggccaggagtcctttcactgcactccagcccccgaaagtggcctcccca
gccctggtcagtcttgtacgtgcaaaggacacaaaccaggagagctactctgacatgcga
atcagtctgaaccagaagcccaacagcagtcgagactttggcttccagacagagtgggac
tccactggagctcacgtcacctccatccaaccaggcagcccagcggagctgtgccaactg
caggtgggagatgaagtgctggcggtgagcgggcacagggtggcagagatgagctacggc
gagtggaagagcagcacagagcaggccctgcagcagggcagcctcaccatggacatacgt
cgccacggcaggaacaactgggacagagacctaccttccctgccgtgtaaaagccataag
accatcaatctgaccagtatgaatcatcatccaacacttataggttcctccaacacagcc
actgttaactcaaccaccagcttggctttcacatctcagggatccatagaaaccaccaag
gaaatcgccatccaacaaatcattgatgtggcatccattggagtgaatggaggtttccat
gacgagacggtgaccatgagaaacaaagagtctgtagaaccaatatctttgaaaaactta
aaacggaggtcagagttttttgaacaaggaggatcagattctgcgatatcagatatgccc
gttccctccatcgctccctcctctaaccactggtcctgggacctggaggaggagcgccgg
aggcaggagaaatggcagaaagagcaggagagacttctacaggaaaaatacagccgtgac
caggagaaactggaggaggagtggcgtcgggcccagcaggatgctgtgactgaggggggc
agacaccaccaagaagagccgagcagcaagagtatcagcctactctgccctctccgccag
cccatcctgccctgggaggatcaggaggaagagaggaggaggaggaggaaagaggaggag
gaggcacagcgaagacaggaggaggagaagaggaaagtggaggaagagcagcgatggcag
gaggagaggatgagaacggaggagcgagatctgctgcgtcttcagaaggagaggaagagg
gagaagcaaaaggaggaggagaggagacagaggaaagaggaggagctgagatggcaaagg
aggaaggaggaagagagggaggacgagaggaagcaccaggaggctgctaatcaacaacac
atggagaatgccagaatgcaggaacagcagcaatgggtgggagactcctgtggctatgcc
aaggtccggcctgagatatcaatggcagacagggcaaagtccaaatctactccagagcta
gacgacgtggagaaaccagagaataaaatgagtgtgaacacactgtgcccaggctggtac
ggccgctcggggggcatggcccagaagttactggaggaggagttgagacgtaaagcagac
aaaaatgaccagagtctccgggctgcgtcagagctggagttggagaggagaaacatcctg
aatgccatgcgatacagagagccagaaagagtgactagcagtggtgggctgggtgaggca
tcgtggaggaatggccagcagagcctgtcccaggcagagctagagaggcagcagatcctg
caggagatgaagaagaagacccaactggccacagacaacagctggatccgccagcgcact
accaccagcaaggaccccgctgccagcctcatcagcagaggtgagtctctggacaacctg
gacactgcaccccgctcttcttggcgctcatcgtggtcaacctcatccatccccaactac
agctcgcctcactcagcgctttccagcctcaacaccacatcctcccacggtgatggtggc
tacggcggtggtggctacagcggcagcggggtcggtggtcgtccaggctcagccaccctg
cccttctccctctccatgagctccctcagaggggctggggggagcaacccgtctccctgg
tcccaatgctcgccatcgccatctccctcccccactacttctcctggcctcgaacccgag
tcacgcccatcctcgcagcaacgcagcaggtcagtgagtggcaagaaaatctgtacgttc
tgtgagacggcgctgggcaagggagccgccatgatcatcgagtccctgggactctgttat
catttgacctgtttcaagtgcattgattgtaagtccgacctgggaggatcggaggccgga
gctgaggtcagaatacggaaccgacagctctactgtaactcctgctacatgcgattcaaa
actggacagccaacctccatgtga
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