Salmo salar (Atlantic salmon): 106581653
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Entry
106581653 CDS
T04363
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106581653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106581653
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106581653
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STAG
SCD
Cnd1
tRNA_bind_3
AHSP
Motif
Other DBs
NCBI-GeneID:
106581653
NCBI-ProteinID:
XP_014019303
UniProt:
A0A1S3NV90
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All DBs
Position
ssa21:complement(5600943..5652810)
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AA seq
1189 aa
AA seq
DB search
MIAEPTVTSRSSVQNENLAVDANFSGAVNHTVGGAGNENSQKSLRGKRRARGGSENAKRR
HTKVTNGSLGRAQTRHLKHGDIEAVTLFEVVTMGRSAMQAVVDDWIEAYITDRDSGLLDL
ISFFIQCSGCKGLVTAEMFQSRQDDVMRKMVEELDEGSGLQYKKFLAFPWILTVTWPMDM
DSGEYPLTMSGPYWRRFRGEFCEFVSVLVTQCQYNVIFDSYLMDTLISLLTELSDSRVRA
FRHTCTLAAMKLLSSLIGVALSLSVSIENSQRLGEVERTKTSGRRNSPRLERIHRKTTEL
QDRRVEIENMMDAIFKGVFLKRYRDVLPEIRSMCMEELAVWMKLYSPVFLTDSYLKYMGW
MMHDKLPDVRLKCVLGLQGLYGDPLLLPKLDLFNSRFKDRMISMTLDKDHEVAVQTLRLL
TLISQSADEVINPEDYKQLFQLVYSSHRPLATTAGELLYTRLLSSPTQTSDLREGANEQD
THTQLTTARVRALLHFYQDSELHQHVVYLVDSLWDCAGAMLKDWSSLTSLLLQDPSTQDA
DLSAEEQSLVVELLVASVRQAVEGPLLAGRSTCKKVVSAREKKSQVDDCGRLTEHFLNVL
PQLLIKYSGSPETVASLLKIPQFLHPDSPNAEFPQALSGLLAEMGAVLELHTDPAVLEAA
ARSYLSLCGEESAWHPLARPVRDAVVQCWADRLAALLGDTLQNGNFTADEEKTGEILSTL
KKLTAFHNAQDLSRWGLYEQVFPLLSVEIIHGGLPTQLTVEALQCVSYSVLWNLNTSRET
LTSREKAVAQRSQMRALCEKCLRCLSHNDQSVKEQAFLSLCDVLTAHNYQLQVWDPSSYG
PLLYTPDPKLQRALLAFILEHVFTGAEYDSHSRGSDVESGEGRLEALHRRRSLLAGYCKL
IVHGVLEMSMAADLFKYYMKYYNNFGDIIKETLSRTRQMDKIESARTLVLCLQQLFLRLK
QEQDSGVTCSSGVQTFSSIKELARRFSLTFGWDQTKSRESLALIHRDGIEFVFQGFVQRA
EKPSPPYLSYLTILSEFSSKLLRPDKKIVYTYLQRYVSEQTISNREECWLPLIYYRASLL
ATGAEGEDAVSFISSDTLKQPSLANRSRSPSVRHSPTADGDMRSPSALTSTETKVRRPHK
ASSSTSPEDRKPEVELGPIVREPPPTIVISEEPFHANEELDVDTVEVDL
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaacctacagtcacctccaggtcctcagtacagaatgagaacttggctgtg
gatgcaaacttctctggagctgtcaatcacacagtgggcggagccgggaatgagaacagt
cagaagagtttgagagggaagaggagggcacggggcggctctgagaatgccaagcgcaga
cacaccaaggtaaccaatggcagtctgggtcgggcacagaccagacacctcaaacatggg
gacattgaggccgtcacattgttcgaggtggtcaccatgggcaggagtgccatgcaggct
gtagttgatgattggattgaggcgtacatcacagacagagactctggcctcctggacctc
attagcttcttcatccagtgttctggttgcaaaggtttggtgacagctgagatgttccaa
agcaggcaggatgatgtcatgaggaagatggtggaggaattggatgagggttcgggtctg
cagtataagaaattcctggccttcccctggatccttacagtgacgtggcccatggacatg
gacagtggggaatatcctctcaccatgtctggtccgtactggcgccggttccgtggtgag
ttctgtgagtttgtgtcggtgttggtaacccagtgtcaatacaatgtgatctttgacagc
tacctcatggacacactcatctctctgctcaccgagctgtccgactcccgtgtacgagcc
ttcagacacacctgcacattggcagcaatgaagttgctaagctctctgattggagtagcc
cttagtctgagtgtgagtatagagaacagccagagactgggcgaggtggagagaaccaag
acatcaggaagacgcaactcaccaagactggagagaatacacaggaagaccacagagctg
caggatagaagggtggagatagagaacatgatggatgccatattcaaaggagtcttcctg
aagagataccgggatgtgctcccagagatccggtccatgtgtatggaagagctggctgta
tggatgaaactttacagtccagtgtttctgactgatagctacctcaaatacatgggctgg
atgatgcatgacaagctacctgacgtgcgtctgaagtgtgtgttggggctacagggtctg
tatggagacccgctcctcctgcccaaactagacctcttcaacagccgcttcaaggacagg
atgatctctatgactctggacaaggaccacgaggtggcagtacagaccctgagactactc
acactcatctcccagtcagctgatgaggttattaatccagaggactataagcagctgttc
cagttggtatactcctcacatcgccctctggctaccaccgcaggagagctgctctacaca
cggctgctcagctcccctactcagacatctgacctcagagagggggcgaatgagcaggac
acacacacacagctgacgacagccagagtgagggctctgctgcacttctaccaggacagt
gagctccatcagcatgtagtatacctggtggacagtctgtgggactgtgctggtgccatg
ctgaaggactggtcatctcttacctcgttacttctacaggacccctccactcaggatgca
gatctgagtgctgaagagcagtctctggttgtagagttattggtggcatcagtgcgtcag
gcagtagagggacccctgctggcgggaaggagcacatgcaagaaggtggtaagtgccaga
gaaaaaaagtctcaggtagatgattgtggcagactcactgaacacttcctcaatgtacta
ccacagttgctgattaagtattcaggaagcccagaaactgtggcatctcttttgaagata
cctcagtttttacacccagactcacctaatgcggaattcccacaggcgttgtcaggcctg
ctggctgagatgggagctgttttggagctccacactgaccctgcggtgctggaggcggct
gctcgctcatacctcagcctgtgtggagaggaatcagcctggcaccccctggcacgacct
gtcagagacgcagtggtccaatgctgggcagacagactggcagcactgctgggtgacaca
ctgcagaatggcaacttcactgctgatgaggaaaagacaggagagattctatccacactg
aagaaactcactgctttccacaatgcccaggacctgtctcgttggggactgtatgagcag
gtctttcctcttctctcagtggagatcattcatggtggattacctacacagctgacagtg
gaagccctgcagtgtgtatcttactctgtcctctggaacctcaacaccagcagagaaacc
ctgacctcacgggaaaaggctgtagcccagaggagtcagatgagagcattgtgtgagaag
tgtctacgttgtctgtcccacaacgatcagagtgtgaaggagcaggcattcctgtctctg
tgtgatgtcctgacggcccacaactaccagttgcaagtgtgggatccctcgtcttacggt
cccctgctctacactcccgacccgaaacttcagagggcgctgctcgccttcattctggag
cacgtcttcactggagcagagtacgacagccacagcaggggtagtgatgtggagtctggt
gaggggaggttggaggcgctccacagacgtaggagcttattggcaggctactgtaaactc
atagtacacggggtgctggagatgagtatggctgctgatctcttcaagtattacatgaag
tattataacaactttggtgacatcattaaggagactctgagcagaacgcggcagatggat
aagatagagagtgctcgcacgttggtgctctgtctgcaacagttgttcctgcgtctgaag
caggagcaggacagtggagtcacctgtagctcaggtgtccaaacattcagcagcatcaag
gagctggccagacgcttctctctcaccttcggctgggaccagacaaagtccagagagtcc
ctcgctctgatccatagggacggtatagagtttgtttttcaggggtttgtccagagagca
gagaagccctctcctccgtacctctcctacctcaccatcctcagtgagttctccagcaag
ctcctcagaccagacaaaaagattgtttacacctacctacagaggtacgtaagtgaacag
accatcagtaacagagaggagtgttggctgccactcatctactaccgagcctccttattg
gctactggggctgagggggaagatgctgtgtccttcatcagctctgatacgctaaagcaa
ccgtctctagccaatcgctcacgctctccctctgtcagacacagccctactgctgatgga
gacatgaggtccccgtctgctcttacctctactgagaccaaagtaaggaggccccataag
gccagcagcagtacaagcccagaggacaggaagccagaggttgagcttggtcccatcgtc
agagaacccccgccgaccatagtgatttcagaggagccgttccacgctaacgaggaattg
gatgtggacaccgtggaggttgacctgtga
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