Salmo salar (Atlantic salmon): 106581679
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Entry
106581679 CDS
T04363
Name
(RefSeq) carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106581679
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106581679
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106581679
Protein phosphatases and associated proteins [BR:
sasa01009
]
HAD phosphatases
Fcp/Scp phosphatases
106581679
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106581679
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
106581679
NCBI-ProteinID:
XP_014019373
UniProt:
A0A1S3NVC9
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All DBs
Position
ssa21:complement(6977337..7058450)
Genome browser
AA seq
1157 aa
AA seq
DB search
MPAEHCEVSELIEVMDSSEPSEQSAEPCIIVDERKNSLDYTESQKVNGQMDPSVHSVDHY
NMNGDHAEESKPSVHYNRHSVGFEQWINKPYEDYPALHKHTNQCTSSELSKSFEECTQHC
ECFEFSKSFEHCANDCLASVFRQHCENCTGHFQSSEQCKPSDQHCMSFEPSEPAESSEFF
EQCKIYDFIPDISESTKSIRSFEHCTGICEYSGKYNHIEHPTEYNETTMSYNDDLKPAEP
TVQQIEICGLFDSEFCTTLEPIHSSDLNMPSQRYAEQVDPNESRHVSKVCEPTEQTLLAE
QSSHQSAEYDIPSGHCELQNNLYEQSETSVQCELTEQCNSCESYPGQHQSINNKYYEPSN
ALYSEEDKSSECASIESSYLEFCINDSINSDLLTDSAESYEALVEEGAPDKSSDDKAKFC
SEIWESFDNCPDAVECEESKADEEKLHLDAVVVEEFFDLFDKKDTYTFSQRRSYTSCFEG
GGVHEQIFEQLIPQVPIMNEEETHILCAKKRLESLALDEKINENKAFSQEEVDQSYDTCA
EVGPFNVDCADDEASASGSFAEEERCESCFEEASANEVDVYEAFVAEDNAIKAEAHKPFV
EKDCIAEDKAGEVQANGPLVDEDNMYEHSAEEASHGSSADVSFVEDDETYEGQNDHTYEP
CFEKEKSFDEEDQKIRIAKDELYKPYARDKAYRSYELCDEDCIAYGCEHTPFSMEGEACA
LCTEEKACEPSDEDHHEYESKANESNVNQEANGFCDEEDSDDIFNEGIDDSTPETYFKVG
VCTEEGEHDAPCAEKSECPNSLEVITKDTVLCTEGSKPAMPDGIEFNGDPTDSFTTSSEE
IDEQNKSSKFCEDLNTPYLSESWEEHNVVSEYFQPPESEDLSEQVSEKTSPIFDGAEHSK
NSMVSEPHEHHAEQTEPTEKSELDEKTELNEFFKIVASEQPSEESEEELSDDESDESCEC
EYCVPPRDQVPEKPLLPQIKSKDAGKICVVIDLDETLVHSSFKPLNNADFIIPVEIEGTV
HQVYVLKRPHVDEYLRRMGELFECVLFTASLSKYADPVSDLLDKWGAFRHRLFRESCVFH
RGNYVKDLSRLGRYLNKVIIVDNSPASYIFHSDNAVPVASWFDDMADTELLDLIPFFERL
SKVDDVYDTLKQQRTAS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaacactgtgaggtgtcagaactaattgaagtcatggattcaagcgagcct
tctgagcaatctgctgaaccctgcatcattgtggacgaaagaaaaaactctttggactat
actgaatcccaaaaggtcaatggacaaatggatccctctgtgcacagtgtcgatcattac
aacatgaatggagaccatgcagaggagagtaaaccttctgtgcattataataggcattct
gtgggctttgaacaatggatcaacaagccctatgaggactatccagctcttcacaagcac
actaatcagtgtacgtcttccgagttaagtaaatcatttgaagaatgtactcaacattgt
gagtgctttgagttcagcaagtcctttgagcactgtgctaatgactgtctagcttctgta
tttaggcaacactgcgaaaattgcacaggacactttcagtcatctgaacaatgcaagcct
tctgatcaacactgtatgtcctttgagccaagcgaacctgctgagagctctgagtttttt
gagcaatgtaagatatatgacttcatacctgacatctctgaatccactaaatcaatcaga
tcatttgagcactgcactggtatttgtgagtattcaggaaaatacaatcatattgaacat
ccaacagaatataatgagactacaatgtcatataatgatgatttaaagcccgctgagcct
acagttcaacaaattgaaatctgtgggctttttgactctgagttttgcacaacattagaa
cctatacattcttcagatttgaacatgccttctcaacgctatgctgaacaagttgatccc
aatgaaagtagacatgtctctaaagtttgtgaacccactgagcaaactttgcttgctgaa
caaagcagtcatcaatctgctgaatatgatataccctctgggcactgtgaactgcaaaac
aatctctatgagcaaagtgagacaagtgtacagtgtgaactgactgagcaatgtaattct
tgtgagagctatcccggtcaacatcaaagcataaataacaaatactatgagcctagcaac
gcattatattctgaggaagacaagtcctctgagtgcgcatccattgaatcaagttattta
gaattttgcatcaatgacagtataaattcagacctattaactgattcagctgaatcctat
gaagcattagtggaagaaggagcaccggacaaatccagtgatgataaagctaaattctgt
tcagagatatgggaatcttttgacaattgtccagatgcggtagaatgtgaggaaagcaaa
gctgatgaagaaaaacttcacttggatgcagtcgttgttgaggaattctttgacttattt
gataaaaaggatacttataccttttctcaaaggcgatcttatacctcctgttttgaaggg
ggaggggttcatgagcagatttttgaacaacttatacctcaagtgcccattatgaatgag
gaagaaacacatatactctgtgccaaaaaaaggcttgaatcacttgctttagatgagaaa
attaatgagaataaagcttttagtcaagaagaagttgatcaatcttatgatacttgtgct
gaggttggaccatttaatgtagactgtgctgatgatgaggcatcagcctctggatctttt
gcagaggaggaaagatgtgaatcttgttttgaagaagcctcagctaatgaagttgacgtt
tatgaagcttttgtagcagaagacaatgctattaaggctgaggcccacaagccctttgtt
gagaaagattgcattgctgaagataaagctggtgaggttcaggccaatggacccttagtt
gatgaggacaacatgtacgaacacagtgcagaggaagcttctcatggatcctctgctgac
gtgtcttttgttgaagatgacgaaacatatgagggccaaaatgatcacacttatgaacca
tgctttgaaaaagagaaatcttttgatgaagaagaccagaaaatacgcattgcaaaagat
gaattatacaagccatatgctagagacaaagcttatagatcatatgaactgtgtgatgaa
gattgcatcgcatatggctgtgaacatacaccattttccatggaaggggaagcttgtgca
ctctgcactgaggagaaagcctgtgaaccaagtgatgaagatcaccatgaatatgaaagc
aaagccaatgagtctaatgttaatcaagaagctaatggattctgtgatgaagaagactct
gatgatatttttaatgaaggaattgatgacagcactcctgagacatattttaaagttgga
gtatgcactgaggagggagagcatgatgctccatgtgctgagaagagcgaatgtcctaac
tcacttgaggttataaccaaagacactgtattatgcactgaaggaagcaaaccagctatg
cctgatggtattgaattcaatggagatccaactgattcctttacaacctcttcggaagag
atagatgagcaaaacaagtcatctaaattttgtgaggatctgaacacaccatatctgtct
gagagctgggaggaacacaatgttgtctcagagtacttccaaccgccagagtcagaggac
ctttcagagcaggtgtctgagaaaacaagccccattttcgatggtgctgaacatagtaaa
aactccatggtcagcgagccacatgaacatcacgccgaacaaacagagcccactgaaaaa
agtgagctggatgagaaaacagagttgaacgaattttttaagattgtggcttctgaacaa
ccaagtgaagagtctgaggaggagctgagtgacgatgagtctgatgagtcctgtgaatgc
gagtactgcgttccgcctagagaccaggtcccagaaaaacctttgctccctcaaatcaag
tcaaaagacgcagggaagatctgtgtggtgattgatttggatgaaacattagtgcacagt
tcattcaagccattgaacaacgctgattttataattccagtggaaatcgaaggaacagtt
caccaggtgtatgtgttgaagcgaccccatgtggatgagtatctcagaagaatgggggag
ttgtttgagtgtgttctgttcactgcgagtttatccaagtatgccgatcccgtctccgac
ctgctggataaatggggtgccttccggcaccgtctcttccgggagtcctgcgttttccac
cgaggaaactatgtgaaagacctgagtcggctgggcaggtacctcaacaaggtcatcatt
gtggacaactctccagcctcctacatcttccactctgataatgctgtccctgtagcatcc
tggtttgacgacatggctgacacagagctactagatctcatcccgttcttcgagagacta
agcaaggtggacgatgtctacgatacgctcaagcagcagaggactgcaagctag
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