Salmo salar (Atlantic salmon): 106581748
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Entry
106581748 CDS
T04363
Symbol
stxbp5l
Name
(RefSeq) syntaxin binding protein 5 like
KO
K08518
syntaxin-binding protein 5
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106581748 (stxbp5l)
Membrane trafficking [BR:
sasa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106581748 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
106581748 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
PEP5_VPS11_N
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106581748
NCBI-ProteinID:
XP_014019471
UniProt:
A0A1S3NW50
LinkDB
All DBs
Position
ssa21:17158841..17394580
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AA seq
1264 aa
AA seq
DB search
MKKFRKVLDGLSSSSPGGVASPSCGSAAGTPTAHAPTPQDIHVQETLVSENFQICKTVRH
GFPYQPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKAHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRAKKVDFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKDGRKESCKPI
LKVEYKTSRNSSEPYVIFSGGLSYDKSGGRRPTLTIMHGKAVTVLEMDHPIVEFLVLCDT
PYSNEVQDPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDII
PILYSIGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEIIVTGHADGTVKFWDASAITLQML
YKLKTSKVFEKPKAGDGRAGELVEEDPYAVQMVSWCPHSRLFCVVGISAHVILYRFSKHD
ANTQIVSLEVRLQFDSEDVISPSEAENNPCFSDPSSHSPQPPGSPGSGTQDSLPCLKVKN
RPVRMPPGYQAELVVQLQWVDGEPPQQITSLDINSAYGLLAFGNCNGLTVVDFLQKTILM
CMGTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSHFYSDSKKRIRTSYQSLTELSDN
QVSMDMERSKSPTSVPYPSSLHYDPRSMPEPVASLRASHCSPVFYLLDNVKGPGRKLSLP
TDLKTDLDHVNGHCTSPTSQPCSVGKPRITGVPEGPRLTRRGPGRPPFRKAQSAACMEIS
LPVSSHTEGGYASRRAMLQQLHGVSMYSHDEHHTTSYNWSERAESRENSFSRSRSSSVSS
IDRDTKESVTTLQFGESYGRKGDALPTACLWVGTSLGVVLLLPISIPTEEEERMEEPITM
GPSGTVLMLKGSVLRFAFLDCGGALIQSPYEVWRDPNGPEDPDRPRRRKLVNFSPSSSQE
ACSDGHLAVVCSEKQAKVILMPTQAVLFTHNITESSFLLRADVVSVCNSVCLACFCANGH
IMTLSLPSLRPLMDINYLPLTDLRIARTFVFTNGGQALYLSSPTEIQRLTYSQEMTDNLQ
DMLGELFTPIETPEAQNKGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGPMGL
ENMKAAAGGVVGDLARARIALDQRGERLGELEERTALMMNSAETFSTHAHQVMLKQKDKK
WYQL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggtactggacggcctgtcatcctcctccccggggggtgtcgcg
tccccgtcgtgcggcagtgcagctggtaccccgaccgctcatgcgcccactccccaggat
atccacgtccaggagacgctagtctcggaaaactttcagatatgcaagacggtgcgccat
ggcttcccgtaccagcccacctgcctggcctttgatccagtccagaagatcctggccatc
ggctccagaacaggaggcatacggatcctgggacggcctggtgtggactgctatagccag
catgaaagtggagccgctgtcctccagctacagttcctcatcaacgagggggcgctggtt
acggcatgtgcagacgacacgctacacctgtggaaccttcgccagagacgcccagccatt
ctgcactcgcttaaattcaacagggagaggatcactttttgccacctccccttccagagt
aaatggctgtacgtgggcacagagcgtggcaatacacacatcgtcaacatcgagtccttc
gttctgtctggatacgtcatcatgtggaacaaggccatagaattagcaactaaagcacat
ccagggcccgtggttcatctgagtgacagcccgaaggatgaaggcaagttgctgataggg
tttgagagtggaacagtagtccaatgggacctccgagccaagaaggttgacttcagaatc
tactacgatgaggctatccattctgtgagctggcatcatgaggggaagcagttcatgtgc
agccactcagatggcagcctgactatgtggaacctgagaaacacagccaggcccattcag
atcacctaccctcatgggaagatactgaaggacgggaggaaagagtcctgtaagcccatc
ctcaaggtggaatacaagacctccaggaacagcagtgagccctatgtcatcttctctggg
ggtctgtcatatgacaagtccggtggaaggaggcccaccctgaccatcatgcacggcaag
gccgtcacggtgctggagatggaccaccctatcgtagagttcctagtactctgtgatacc
ccatactccaacgaggtccaggatccttatgcggtggttgtgcttttagaaaaggacttc
atcgtggtggatctgacacagagcaacttccccatctttgagaacccctacccaatggac
atccacgagtctcctgtcacctgtacggcttacttcgctgaatgccctcctgacatcatc
cccatcctctactccataggggccaagcagaagaagactggctacagccacaaggagtgg
ccagtgagtggtggcacatggacactaggttcacagacatacccagagatcatcgtcaca
ggacacgcagacggaaccgtaaagttttgggacgcctctgctattacactgcagatgctg
tacaagctgaagacgtccaaggtgtttgagaagcccaaggcgggagacggtcgggcgggc
gagctggtagaggaggacccctacgccgttcagatggtcagctggtgcccacatagccgt
ctcttctgtgtggtgggcatttctgcccacgtcatcctctaccggttcagcaaacacgac
gccaacacgcagatagtgtcactagaggtgcgtctgcagtttgattcggaggacgtcatt
tccccgtcagaggcagagaacaacccgtgtttctcggaccccagctcccactccccccag
ccgcccggtagccctggcagtggcacacaggacagcctcccctgcctcaaggtgaagaat
cgtccagtgcggatgcccccggggtaccaggctgagttggtggtgcagctgcagtgggtg
gatggagagcccccccagcagatcaccagcctggacatcaactctgcctacggcctccta
gcgtttgggaactgtaatggtctcacggtggtggacttccttcagaagacgatcctgatg
tgtatgggcacgctggacctgtatggagccgcggacccctaccaacgactcacacgctct
ccacgtaagaacagacagtccacctcagacttttgcatgcgtggcctgtctcacttttat
tcagattcaaagaaaaggatccgtacgtcctatcagagccttacagaactctccgataac
caggtatccatggacatggagagaagcaagtcacccacctcagttccctacccaagctcc
cttcactatgaccctcgctccatgcctgagcctgtggccagtctgagagccagccactgc
agtccagtcttttacttactggacaatgtaaagggacccggcagaaagttaagtctgcca
acagatcttaagactgatcttgatcatgtcaatggacattgcactagtcccacctcccag
ccctgctccgtggggaagcctcgcatcacaggggttcccgagggcccgcggctcacccgg
agagggcctggccgaccgcccttccgcaaggcccagtccgccgcttgcatggagatctct
ttgcctgtttcctcccacacagaaggtggttatgcgtccaggagggcaatgcttcagcag
ttacatggagtcagtatgtactcccacgacgagcaccacaccacctcctacaactggagc
gagagagcagaaagtagagagaactcgttcagtcgctcgcggagctccagtgtgtccagc
atcgatcgcgacaccaaggagtcagtgaccacgctgcagttcggagagtcctacggccgt
aaaggcgatgctctgcctaccgcctgcctgtgggtgggcaccagcctgggcgtggtcctg
ctcctgcccatatccatccccacagaagaggaggagaggatggaggagcccatcaccatg
gggcccagtggtaccgtcctgatgctaaaaggctctgtgttgcgatttgccttcctggac
tgtgggggcgctctcattcagagtccgtacgaggtgtggcgggaccccaacggtcccgag
gaccccgaccggccccgcaggcgcaagctggtcaacttctccccgtcatcatcccaggag
gcgtgcagtgacggtcacctggccgttgtgtgctctgagaagcaggccaaggtcatcctc
atgcccacccaggctgtcctgttcacccacaacatcaccgagtcctccttcctcctgcgg
gctgacgttgtctccgtctgcaacagcgtctgcctggcctgcttctgcgccaacggacac
atcatgaccctaagtttgcccagtctaagacccctgatggatatcaactaccttcccctg
accgacttgcgtatcgccaggacctttgttttcactaacggaggccaggccctgtatctg
agctctcctacagagatacagcgcctcacatacagccaggagatgacggacaacctacag
gacatgctgggggagctgttcactcctatagaaacaccagaggcccagaacaaaggattc
ctcaagggcttcttcggtggcaatgcccagaccttcgacagagaggagctgtttggggag
gcagcagcgggtaaggcctctcggagtttggcccagcacatccctggtccaatgggattg
gagaacatgaaggctgcagccggcggcgtcgtgggggacctggcccgagcccgcatcgcc
ctggaccagagaggagagaggctgggcgagctggaggaacgcaccgccctcatgatgaac
agcgccgagaccttctccacacacgcccaccaggtgatgctgaaacaaaaggacaagaaa
tggtatcagctttaa
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