Salmo salar (Atlantic salmon): 106581844
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Entry
106581844 CDS
T04363
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106581844 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
106581844 (RBM8A)
03015 mRNA surveillance pathway
106581844 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106581844 (RBM8A)
03041 Spliceosome [BR:
sasa03041
]
106581844 (RBM8A)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106581844 (RBM8A)
Spliceosome [BR:
sasa03041
]
Complex C
Other components
EJC/TREX
106581844 (RBM8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
106581844
NCBI-ProteinID:
XP_014019730
UniProt:
B5DGI7
A0A1S3NWT5
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All DBs
Position
ssa02:complement(24907588..24911348)
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFMTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcacgaagcgggaggagaggattttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagagaaggcaaagaggagaaagggacgaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgatacagtggagcaggat
ggagacgagccaggtcctcagagatcggtggagggttggatccttttcatgactggggta
catgaagaggccactgaggaggacatccacgacaagtttgcggagtttggagagatcaaa
aacctacatctgaacctggaccgaagaacgggttacctcaagggttatgcgctggtggag
tatgagacgtacaaagaagcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagcctatcagtgtggactggggctttgtcagaggaccacccaagagcaagaggagg
ggtggtggacgtagacgcagcaggagtccagacaggagacgacgttga
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