Salmo salar (Atlantic salmon): 106581898
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Entry
106581898 CDS
T04363
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sasa01009
]
106581898
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
106581898
Protein phosphatases and associated proteins [BR:
sasa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106581898
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106581898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
106581898
NCBI-ProteinID:
XP_014019810
UniProt:
A0A1S3NX17
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All DBs
Position
ssa21:complement(18894788..18901571)
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AA seq
1058 aa
AA seq
DB search
MAPIQQEAEIQFAQRLASNEKPMRTKAIKKLRKYISVRSQKVNGGFTGDELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLMHSFQNVQSMFLFLETFLQTIKREWTGIDRLRMDKFFQL
VRFVFRNSFEMMKRKEWETSVVTRFLELLTAQILHSTSGAPCGLQFHILDLYTTELAAVG
SAELTAAQNLTFIDPFCKTASKTKDRILLKAICGSIFSAIVDQAPFAIEDLLKEVNATGG
GSEESDSGQASEEEEEKKEPPKKAVKKSPMKTTGKQTNCTVSTEEDEDGLEDEDEMFHLE
SDSESEIPDDGGIGPVLQFDYSALADRLFGLASRSNTPSHNRQRLYKVIKTLRDLSDGVF
PQDEYPEEVSTDEDDDEMFGSRKRMKRGRALEEEESSPPKKRKGGWIILAKEKCSLTGKK
NDSKPGKSDQRAASDKSKPAKTPGDTTTRKKRSMGEVKSDEQNRVTEELKVKAQADTTTT
TESETTDAKKAAPTEAKTELSATIDSVEAGEKGVKKETSTTAERTDVGVKLEAILEEDAS
PMKVTDTPTEVTAVATEVQSETPQDVVVGSLSSAMEMGQKAQSETPVPDSTSSKKKKKTK
KSKTPVQEEGEAVAEPETNTDVPETSVKATETEDQLAPATQDGEGATEPESAPETATTST
TKRKGRRKSTKQVPEEQTTVEEVETKPDAVEEIMATPLKKTRRMKAEQSLESTKEEVAET
DSAPVDTTPAGPKPLATPAEEPPADVHIATTFLKKKKLKAAKSEEESVEVEGEMQPETEA
DVILVVAETVPAEVATPILLKKKKKKTAKAEEQSVEAEGKIKTAADSNRTLVDAEAELVE
VSTPAPLKKKKKKAAPVSEEQEPDTTAVEESIAEEQPAKVDLETPVKKRKIPVVIEVEAE
ELEAEAEAARVNDSKEPSTPVNAKKTKKMMLKKAKGGEESDFITLQNHATIPTPIFFKRA
KGSPSTSLSSKKKCQTPKSESKKVTFGLNKNKTAEFRKTDRSLLVSPEGSSRVPFDPQQK
PLFGVLKSPMASLTNITKKKTKSTPKATPKRPTAADFF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaatacaacaagaagcagagatccagttcgctcaaagattggcatctaacgag
aagcccatgcggacaaaggccatcaagaaactaagaaaatatatcagtgtcaggtcacag
aaagtcaacggtggtttcacaggcgacgagttacttaaactatggaagggcctcttttat
tgcctgtggatgcaggacaagccacttcttcaggaggagttgtcgaatcagatatctggc
ctgatgcatagctttcaaaacgtccagagtatgtttttgtttctggagactttcctgcag
accatcaaaagagaatggactggcattgacaggcttcgcatggataagtttttccagctg
gttcgtttcgtgttcaggaactcttttgaaatgatgaagaggaaagaatgggagaccagt
gtagtgaccaggtttctggagctcctgactgctcagatcctccacagcaccagcggagcc
ccttgtgggttgcagtttcacatactggacctctacacgaccgagctggctgcagttggc
tcagctgagctcacagcggctcagaacctgacgtttatcgacccattctgcaaaacagca
tccaaaaccaaagatcggatcctgctcaaggctatttgcggcagcatcttcagtgccatc
gtggaccaggctcccttcgccattgaagacctgctgaaggaggtgaatgctacaggtgga
gggtctgaggagtctgactcgggacaggcttctgaagaagaagaagagaaaaaggagcct
cctaaaaaagctgttaagaaatcccccatgaaaaccactggaaagcagaccaactgcacc
gtatcaactgaggaagatgaagatggtcttgaggatgaagatgaaatgttccatctggag
agtgattcggagtctgagataccagatgacggggggatcggacctgttctccaatttgac
tactctgccctggcggacaggctgtttgggctagccagccgtagcaacacccccagccac
aacagacagagactctacaaagtcatcaagactctccgggacctcagtgatggagtcttc
ccacaggacgagtacccagaggaagtgtcgacggatgaggatgacgatgaaatgtttggc
agcagaaagaggatgaagaggggaagggccctggaggaagaagagagctcaccacccaag
aaacgtaaaggtggatggattatcttggcaaaggagaaatgctcactaacaggcaagaaa
aatgactcaaaaccaggaaagtcagaccagcgtgcagcatcggacaagagcaaaccagca
aagacacccggtgacaccaccacgaggaaaaagaggagcatgggagaagtgaagagtgat
gagcagaacagggtgacggaggagttgaaagtgaaggctcaggcggacacaactactaca
acagagagcgaaacgacagacgctaagaaggcagcacctacagaagcaaagacggagctc
tctgccacaatagactctgtagaggccggagagaagggggtaaagaaggaaacctctacc
acagccgagcgcaccgatgttggggtaaagctagaggcaatcctggaggaggatgcctct
cctatgaaggtcactgatactcccacagaggtaactgccgtggcgacagaggtccaatca
gaaactccacaggatgtagtggtggggagtctatcatcggccatggagatgggacagaag
gcccaatccgagacaccagtaccagacagcacgtcgtccaagaagaaaaagaagaccaag
aagtctaaaacgcctgtacaggaggagggggaagcggtagcagaaccagagactaataca
gatgtgccggagactagtgtgaaagccacggagacagaagaccagcttgctcctgctacc
caggacggagagggggctacagagccagagagcgccccggagactgctactaccagcaca
accaagaggaagggcaggaggaagagcaccaagcaggtgcctgaggaacagacaaccgta
gaggaggttgagacgaagccagatgctgtagaagagatcatggccaccccactaaagaag
actaggaggatgaaggctgaacagagtcttgagagcacaaaggaagaggtcgctgaaaca
gactcagcaccagtagacacgacaccagcaggccctaaaccgctggccactccagctgag
gagcctccagctgacgtccacatcgccaccactttcctgaaaaagaagaaactaaaggcg
gccaagtctgaagaggagagtgtggaggtcgagggtgaaatgcagccagaaactgaagcg
gacgtcatacttgtagtcgctgagacggtgccagcagaagtcgctacaccaatcctgctc
aaaaagaagaaaaagaagacggccaaggctgaagaacagagcgtggaggccgagggtaaa
atcaagactgcggcagactcgaaccgtacacttgtagacgctgaggcggagctggtagag
gtttccacaccagctcccctcaagaagaagaaaaagaaggcagcaccggtatctgaggag
caggagccagacaccacggcagtggaggagagcattgcagaggagcagcccgcaaaggtt
gacctggagactcccgtgaagaagaggaagatcccggtagtgatagaggtcgaggctgag
gagctggaggctgaggcagaggctgctagagtcaacgacagcaaagagccatccacaccg
gtgaacgccaagaaaacaaaaaagatgatgctcaagaaggctaagggaggggaggagtct
gacttcattacgctccagaaccatgccaccatccctacacccatcttcttcaagagagcc
aagggaagccccagcacatcgttgtccagcaagaagaagtgtcagactccaaaatctgaa
tccaagaaggttaccttcggacttaacaaaaacaaaactgctgaatttaggaagacggat
cgcagcctgctggtgagtccagaggggtcgtccagagtgccatttgatccccagcagaaa
cccctgttcggagtgctgaaatccccaatggcctctcttaccaacatcaccaagaagaag
accaagagcaccccgaaagccacccccaaacgccctactgctgctgactttttctag
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integrated database retrieval system
