Salmo salar (Atlantic salmon): 106581949
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Entry
106581949 CDS
T04363
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106581949
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106581949
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106581949
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106581949
Ubiquitin system [BR:
sasa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106581949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
106581949
NCBI-ProteinID:
XP_014019982
UniProt:
A0A1S3NX61
LinkDB
All DBs
Position
ssa21:complement(22719540..22809688)
Genome browser
AA seq
2652 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAQSQSQPPLPQNQTSSPNSTNENSPVSPPDEQGQGDGP
PQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKVGSEFKGWLVDLINKFGSL
NGFQTLHDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTD
EELKKEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGK
MNALNEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVE
KLEKILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDC
FKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSA
HIKILDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKI
PINIQTNLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEF
DPQTVRAGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREAC
FKWYAAIINIITSKGYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFK
AVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQ
VNQVEIHEDFIQSCFDRLKASYDTLRVLDGDKDSINLARQEAIRMVRVLTVLKEYINECD
SDYHEERTILPMSRAFRGKHITLTVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKA
NATHTKIELFIGGDVVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTG
SPGNHGNHFSDGPNPEVESCLPGVIMSLHLRYISFLWQVADLGCSINMPLLRDGARVLMK
LMPPDNSTVEILRAVCLDHAKLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASAT
LGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFG
HVKAVAEACQPNAEGTIPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQI
SDENFFQASKYIPDICVIRAVQKIVWASGCGTIQLVFSSNEEISKIYEKTNAAKEPDGED
EQVCCEALEIMTLCFSLLPTALDTLSKEKAWQTFIIDLLMHCHSKSVRQMAQEQFFLMAT
RCCMGHRPLLFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLN
NEIDWLKRIRDEVKRTGETGVEETILEGHIGITKELLAFQTSEKKYYIGCEKGGANLIKE
LIDDFIFPASNVYLQYMKSGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQMVD
TLTDMYYLGCEALTEWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGIL
AIEGTGTDVDDDMSGDEKQENESNVDPRDEVFNYHHQFDDKPSLSKSEDRKEYNIGVLRH
LQVIFGHLASSRLQYYIPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGH
PAMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGA
NAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEP
YTVAGVAKLEGDDVNPENQVIQQNEPSEPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQ
RNVGGADGERNRWYKFDDGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKR
WWNAYILFYERMDSLDKDSELVKYIQELTISSSSNNKPPHQVKMPGVIECSVRKQNVQFM
HNRMQYSLEYFQFVKKLLTCNSVYLNPPPGQDHLLPDAEEMAMISVQLAAKFLFSTGFHT
KKVVRGPASDWYDALCVLLRHSKNVRYWFAHNFLFAYANRFSEYLLECPSAEVRGAFAKL
IVFIAHFSLQDGPCPSPTASPVGASTQPQACDNLSLSDHLLRTVLNLLRREVSEHGRHLQ
QYFNLFVMYANLGLAEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLV
RCCDVATRMQSSINGNPPLPNPYGDANQTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNS
EETVKLLRFSCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIH
NVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWT
WAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPE
ECHLTKHGEAVSEEDAAMRKSSSPQQLLPGEGTGQQHTEPDDQEAPEDQDISLYPHSSPG
TTTQFQQQNNHPHGQPYTGPAAQHMNNPQRPGPVPSSAPGPAPGAGPQAQDNWESTEEVP
STTSLAPAPPKE
NT seq
7959 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacacgtggctctcctgttgggggcaacgacaaccaggcaggccaggcg
cccgacgctcagagtcagagccagcccccgctgccacagaaccagacgtcgtctcctaac
tccaccaatgagaactctccagtgagccccccggatgagcagggtcagggggatggcccc
ccccagctggaggaggaggagcctgccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccggtgggttgttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaagtgtgaggcgtgtcag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggccgtc
agcgggtggaagtttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctctctcaggactggttccccttgctggagctgctggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gccggggtgcagctggccgatgacgagctcttcgcccgcccccctgaccctcgctccccc
aaggtagggtccgaattcaagggctggttggtggatttaataaacaaatttggctcgtta
aatgggtttcaaacactgcacgatcgcttcatcggtggccaagcactgaacgtccagatc
atcgccgcacttatcaagccttttgggcagtgttacgagttcctcacattgcacacggtg
aagaagtacttcctgcctgtcatcgagatggttcctcagtttctggagaacctgacagat
gaggagctgaagaaagaggccaagaacgaagccaaaaatgacgccctgtccatgatcatc
aagtccctgaagaacctggcctccagggtgcctgggcaggaggagaccgtgaagagctta
gagatttttaggttaaaaatgattcttaggttattgcaaatttcctcttttaatggcaaa
atgaatgcactaaatgaagtaaacaaggtaatctcaagtgtgtcctactacacacatcga
catggcaaccctgaggaggaggagtggcttactgcagaacgcatggcggagtggatccag
cagaaccacatcctgtccatcgtgctgagggacagtctgcaccagcctcagtacgtagaa
aaactagagaagatacttcgcttcgtcatcaaagagaaagctcttaccatgcaggacctg
gacaacatctgggctgcacaggctggtaaacatgaggccatcgtgaagaacgtccacgac
ctcctagccaagctggcctgggacttctctcctgagcagctcgaccacctctttgactgc
ttcaaggcgagttggacgaatgctagtaagaagcagcgtgagaagctgctggagctgatc
cgtcgtctggcagaggacgacaaggatggagtgatggcccacaaggtgctgaacctgttg
tggaatctggctcacagcgacgacgtgcctgtagacatcatggaccaggccctcagtgct
cacatcaagatactggactacagttgctctcaggatagagacacgcagaagatccagtgg
atcgatcgcttcatagaagagttgcgcaccaatgacaaatgggtgattcctgcactaaag
cagatccgagagatctgtagcctgttcggagaggctcctcagaatctcagaaagaaaatt
cctattaacatacaaacgaacttagcgggtcagacccagaggagtcctcatgtgttctat
cgtcatgacctgatcaaccagctccaacacaaccatgctctggtcacgctggtggctgag
aacctttctgcctacatggagaccatgaggcagttctctaaagccgagcaggcagagttt
gacccccagacggtgagggcagggagccgctacagccacgtacaggaagtccaggagaga
ctcaacttcctgaggttccttctgaaggatggccagttgtggctctgtgctcctcaggcc
aaacagatctggaagtgcctggccgaaaacgctgtcttcctatgtgatagagaggcctgc
ttcaaatggtacgctgccatcatcaatattatcacctcgaaagggtactccaagctgatg
ggagatgagccagacctggacccagacattaacaaggacttctttgagaacaacgtcctc
cagctggacccgtctctgctcacagagaacggcatgaagtgcttcgagaggttcttcaag
gctgtcaactgccgggagggcaagctggtggccaaacgcagggcctacatgatggacgat
ctggaactcataggactggactacctctggagggtggtaattcaagggagcgatgacatc
gccagtcgagccatagacctgctgaaagagatctacaccaaccttggaccaaaactacaa
gtcaatcaggtagagatccacgaggatttcatccagtcgtgtttcgaccgtctgaaggcg
tcgtacgatacgctgcgtgtcctggacggggacaaggacagcatcaacttggcccggcag
gaagccatccgcatggtccgtgtgctcaccgtgctcaaggagtacatcaacgagtgtgac
agtgactaccacgaggagaggaccatactgcccatgtccagggcgttccgggggaagcac
atcacgttgaccgtgcgtttccctaaccagggccgtcaggtagatgacctggacatctgg
tctcacaccaacgacaccatcggctcggtgcgccgcggcatcctcacacgcatcaaggcc
aacgccacgcacaccaagatagagctcttcattggcggggatgtcgtcgacccggccgat
gacagaaagctgattggccagctcaacctcaaagacaaaacgttgatcacagccaagctg
acccaggtgagtgccaacatgccgtccagcccagacagctcctcggactcttccaccggc
tcacctggtaaccacggcaaccacttcagcgacgggcccaacccagaggtggagagctgt
ctccctggagtgatcatgtctctccacctgcgctacatatctttcctgtggcaggtagcg
gacctgggctgtagcattaacatgccactgttacgagatggcgccagggtactcatgaag
ctaatgcctccagataacagtaccgtggagatcctgcgtgccgtgtgtctggaccatgcc
aagctgggagagaacagcctcagccccacactggactcgcgcttctttggcccctcgcca
tcacaagtcctctacctcatagaagtggtgtatgccctactcatgccagccagcgccacg
ttgggggaggatgccagcgacttccagtacaacttcctgaagagtggtgggctgcctctt
gtactgagcatgctcacacggaacaacttcctgccttcggccgacatggagacacggcga
ggggcatacctcaacgctctgaagatcgccaagctgctgctcaccgccgtggggttcgga
cacgttaaagctgtggccgaggcatgccagcccaatgctgaggggaccataccagtctca
ccgatcaaccaggccactcatgaccaagccctggtcctccagagtgccctgcagaacatc
cccaaccctgcctcagagtgtatgctccgcaatgtagctatacgcctggctcagcagatc
tctgacgagaacttcttccaggcatccaaatacatcccagacatctgtgtgatccgggcg
gtgcagaagatagtgtgggcgtcgggctgtggcaccatacagctagtctttagctccaac
gaagagatcagcaagatctacgagaagacgaatgcggctaaggagccggacggggaggat
gagcaggtgtgttgtgaggccctggagatcatgactctgtgtttctccctgctgcccacc
gctctggacacactcagcaaggagaaggcctggcagaccttcatcatagacctgctaatg
cactgtcacagcaagtcagttcgtcagatggcccaggagcagttcttcctcatggccacc
aggtgttgcatgggccatcgaccccttctcttcttcatcaccctcctcttcactgtgctg
gggagcaccgctaaggagcgggccaagcatgctggggactacttcaccctgctcaggcac
ctcctgaactacgcctacaacagcaacatcaacctgcccaacgcagaggtgctgctcaac
aatgaaatcgactggctcaagaggattagggatgaggtaaagaggacaggggagacgggc
gtagaggaaaccatcctggagggtcacatcgggatcaccaaggagctgctggccttccag
acatcagagaagaagtactacatcggctgtgagaagggaggggccaacctcatcaaggag
ttgatagatgacttcattttcccagcatcgaatgtgtacctgcagtacatgaagagtggg
gagttccccacggagcaagccatccctgtctgtagcagccccgcctctatcaacgcaggc
ttcgagctgctggtggcgctggcggtgggctgtgtccggaatctaaagcagatggttgac
acgctcactgacatgtactacctaggttgtgaggctctgacagagtgggagtatctcccc
ccggtgggaccgaggcccactaaaggctttgtgggactgaagaacgccggggccacctgc
tacatgaactcagtcatccagcagctctacatgatcccgcccatacgcaatggcattctg
gccatcgagggcaccggcaccgatgtggacgatgacatgtccggtgatgagaagcaggag
aacgagagtaatgtggacccgcgagatgaggtgttcaactaccaccaccagtttgatgac
aagccatcgctcagtaagtcagaggacaggaaggagtacaacatcggggtgctgcgccac
ctgcaggtcatctttggccacctggcctcctccagactgcagtactacataccgagaggc
ttctggaaacagttcaggttatggggtgagccggtgaacctgcgagagcagcatgatgcc
ctggagttcttcaactctctagtggacagtctggacgaggctctgaaagccctgggtcac
ccagccatgctcagtaaggtgctggggggatcctttgctgaccagaagatctgccagggg
tgcccacataggtatgagtgtgaggagtcgttcaccactctgaatgtagacatcaggaac
caccagaacctgttggactctatggagcagtacgtcaaaggagacctgctggagggtgct
aacgcataccactgtgagaagtgcaacaagaaggtggacacagtgaagcggctgctgatc
aagaagcttcccccagtgctagccatccagctgaagaggtttgactacgactgggagagg
gagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatggagccc
tacacagtagccggggtggccaagctggagggggacgacgtcaacccagagaaccaggtg
atccaacagaacgagccctctgaaccagagcccccaggcagctccaagtaccgcctggtt
ggggtgctggtccactcaggccaggccagcggcggacactactactcctacatcacacag
aggaatgtgggtggggcagacggcgagcggaaccgctggtacaagtttgacgacggcgac
gtgacggagtgcaagatggacgacgaggaggagatgaagaaccagtgcttcggaggggag
tacatgggcgaggtgtttgaccacatgatgaagaggatgtcgtaccggcgtcagaagcgc
tggtggaacgcctacatcctcttctacgagcggatggactcactggacaaggacagcgag
ctggtcaaatacattcaggagctgaccatctcgtcctcgtccaacaacaagccgccgcac
caggtcaagatgcccggtgttatcgagtgcagtgtgcgcaagcagaacgtgcagttcatg
cacaatcgtatgcagtacagcctggagtatttccagtttgttaagaaacttctgacctgt
aacagtgtctatttaaaccctccgccaggacaggaccatctactgcctgatgcggaggag
atggctatgattagtgttcagctggctgctaagttcctcttcagcactgggttccacacc
aagaaagtagtgagggggcccgccagtgactggtatgatgcgctttgcgtcctgctgaga
cacagtaagaatgtacgctactggtttgcacacaacttcctgtttgcctacgccaaccgc
ttttccgagtacctgctggagtgccccagcgccgaggtccggggcgcgttcgccaaactc
atcgtcttcattgcacacttctccctgcaagacggaccctgcccctcccccactgcctct
cctgtcggagcctccacccaaccacaggcatgtgataacctgagtctcagtgaccacctg
ttgaggactgtgttgaacttgctcaggagagaggtgtcagagcacggccgacacctgcag
cagtacttcaacctcttcgttatgtacgccaacctggggcttgcagagaagacccagttg
ttgaagctgagtgtcccagctaccttcatgctggtggctctagacgaggggcctggccct
cccataaagtaccagtatgctgaactaggcaaactgtacaccgtagtctcccaactggtg
cgctgctgtgacgtggccacgcgcatgcaatcctccatcaatggtaacccccctctccct
aacccgtacggtgatgccaaccagaccaccccggtgatgcccgtgcagcagctggtggga
gagatcctgttcgtaaggaccagctacgtgaaaaagatcattgaggattgcagcaactca
gaggagacggtcaagctgctgcgcttcagctgctgggaaaacccccagttctcctccact
gtactatcagagctgctctggcaggtggcgtactcgtacacctacgagctgaggccttac
ctggacctgctgctgcagatcctgctcattgaggactcctggcagactcacaggatccac
aacgtgctgaagggtataccagatgacagggatggcctatttgacaccatccagcgctcc
aagaaccactaccagaaacgggcctaccagtgtatcaagtgcatggtagccctcttcagc
aactgctctgtggcctaccagatactacagagtaacggggacctgaagcgtaagtggacg
tgggcagtggagtggctgggggacgagctggaaaggaggccctacacagggaacccccag
tacacctacaacaactggtctcccccagtccagagcaacgagacctccaacggatacttc
ctggagcgctcgcactccgcacgcatgaccctggccaaggcctgtgaactctgccctgag
gagtgtcacttaacgaagcacggtgaggcggtgtctgaagaagacgctgccatgcggaaa
tcatcctcgccacagcagcttttaccaggggaagggacaggacagcagcacactgagccc
gatgaccaggaagcccctgaagatcaggacatctccctctaccctcattcgtctccaggg
actacgacacagtttcagcagcagaacaaccacccccacgggcagccgtacacaggccca
gctgcccagcacatgaacaacccccagcgtcccggccctgtcccttcctctgccccaggc
cctgcgcccggcgcaggcccacaagcacaagacaactgggagagcactgaggaggtcccc
tccaccacctccttggcccctgctccgcctaaggagtaa
DBGET
integrated database retrieval system
