Salmo salar (Atlantic salmon): 106581965
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Entry
106581965 CDS
T04363
Symbol
pou2f1
Name
(RefSeq) POU class 2 homeobox 1
KO
K09364
POU domain transcription factor, class 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106581965 (pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106581965 (pou2f1)
03021 Transcription machinery [BR:
sasa03021
]
106581965 (pou2f1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106581965 (pou2f1)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
106581965 (pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
DUF3839
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
106581965
NCBI-ProteinID:
XP_014020025
UniProt:
A0A1S3NXM9
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Position
ssa21:23194789..23216530
Genome browser
AA seq
767 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESQSGDGNTGVQTNGLDFQRQAVQATNAIT
NAHAQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQMFLQQAQAQ
LLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPVQITSIPSVSTHLPGQLSQLGY
PYEMATFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQTPQGQQSMYTT
QSFLQAQNLLTQLPQSQANLLQTQPSINLASQPATPSHTIAATPIQPLSHSQTPPKRLDT
PSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSF
KNMCKLKPLLEKWLNDAVCAENLSSDLALSSPCGLGSPGLGMEGLNRRRKKRTSIETNIR
VALEKSFLEQNQKPTSEEITIIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGHSITGTG
STPIKTIFTPTSPLVASTASLVTSNTPTTLTLNPVMPLTSTSVSGLTLTGTTIGATTNTA
SVISTAPMVTAVTSSTSLSSCPTALQVTAAETGGTQEHTVVTQAPSSLATNLGTGQVMVA
GPGLSAALQGAAQLPTSSSYASMAGLNPGLNPGLMASSQFTPGGALLSLAPGGLGGAINP
AMLSNSTLATIQGLWSALASGGTLPITSLDGSGNLLFANTSAGSTPNLVQPLFLNPQNLS
LLTSNPVSLVSAGAAGGGALQVTANHQVTTATVPVPVSTITTASKAQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcagaaactagtaaatgtgcaatggagagtcagagtggggacggaaacacagga
gtccaaacgaatggactggactttcagaggcaggcggtgcaggccacaaacgcaatcacc
aatgcacacgcacaggctctgctccaacagtccaagtctgaagactcgggtgcaattccg
acctctgtccagcagggcgtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagcgcagcagcagatgtttttgcagcaggcccaggcccag
ctcttggcagcagccatgcagcagcaatcagccagccagcagagcagcaccacgggggca
agcatctctgcctccgcagccacccccatcacacagctgcccctgtcccagcccgtccag
atcacctctattccctctgtctctactcatctcccaggccagctaagccagctgggatac
ccgtatgagatggcgaccttcagcagttacctacctcagttacagcagctgcagcagcag
aacctgaccatgccccagtttgtcctggttcaacctggccaccacatcgccacccagctg
cagcctggccagttcatcatctcacagacgccgcagggccagcagagtatgtacacaacg
cagagtttcctgcaagcccagaatcttctaactcaactacctcaaagccaagccaacctc
ctgcagactcagccaagcatcaaccttgcctcacagccagcgactccatcccacacgata
gcagccacgcccatccagcccctgtcccacagtcagacaccacccaaacgcctggacaca
cccagtctggaggagcccagcgacctggaggagctggaacagttcgctaagaccttcaaa
cagagacgcatcaaactgggcttcacacagggggatgttggcctggccatgggcaagctg
tacggtaacgacttcagccagaccaccatctcccgcttcgaggccttgaacctcagcttt
aagaacatgtgcaagctgaagccacttctggagaagtggctcaacgatgcagtttgtgca
gagaatctgtcgtctgacctggccctgtccagcccttgcggcctgggctcccccggtctg
ggcatggagggactcaaccgccgacgcaagaagaggaccagcatcgagaccaacatccgc
gtggccttagaaaagagctttctggagcagaaccaaaaacctacctctgaggagatcacc
ataattgctgaccagctcaacatggagaaggaggtgatccgggtgtggttctgtaaccgt
cggcaaaaagagaagaggatcaatccccccagcagcggacacagcatcacagggacaggc
agcacccccatcaaaaccatcttcaccccaactagccccttggtggccagtacggcgagc
cttgtgaccagtaacacaccaaccacactcactttaaacccagtgatgcctctcaccagc
accagcgtctccggcctgaccttgacaggcacgacgatcggagcgaccacaaacacggca
tccgtcatctctacggcacccatggttactgcggtgaccagctccacctcgctaagctcc
tgccccacggccctccaggtcacggcggcggagacgggtggaacccaggagcacacggtg
gtcacgcaggcgccatcgtccctagcaaccaatctggggacaggtcaggtgatggtggct
ggaccggggctgtcagcggccctgcaaggcgctgcccagttacccaccagttctagttac
gcctccatggctgggcttaacccaggacttaacccaggactgatggcatcctcgcagttc
actcctgggggggccttgctgagcttggctccgggtgggcttggaggggctataaacccc
gccatgttgagcaacagcaccctggccaccatccaaggtctatggagcgctctggcatcg
ggtggcactctccccatcacctcgctggacgggagtgggaacctgctgttcgctaacacc
tcggctggcagcacccccaacctggtgcaacccctcttcctgaacccccagaatctgtcc
ctgctcaccagcaaccccgtcagcctggtgtcggctggagccgccgggggaggagccctg
caggtcacagccaaccaccaggtcaccacggcgaccgtcccagtgcccgtctccaccatc
accactgcctccaaggcccagtga
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