KEGG   Salmo salar (Atlantic salmon): 106582071
Entry
106582071         CDS       T04363                                 
Name
(RefSeq) ras-related protein Rab-5A-like
  KO
K07887  Ras-related protein Rab-5A
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04137  Mitophagy - animal
sasa04144  Endocytosis
sasa04145  Phagosome
sasa04148  Efferocytosis
sasa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106582071
   04145 Phagosome
    106582071
   04137 Mitophagy - animal
    106582071
   04148 Efferocytosis
    106582071
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106582071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    106582071
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    106582071
   04031 GTP-binding proteins [BR:sasa04031]
    106582071
Membrane trafficking [BR:sasa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    106582071
 Endosome - Lysosome transport
    106582071
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106582071
  Exosomal proteins of other body fluids (saliva and urine)
   106582071
  Exosomal proteins of colorectal cancer cells
   106582071
  Exosomal proteins of bladder cancer cells
   106582071
GTP-binding proteins [BR:sasa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    106582071
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 106582071
NCBI-ProteinID: XP_014020265
UniProt: A0A1S3NYB3
LinkDB
Position
ssa02:25678513..25685969
AA seq 216 aa
MASRGGATRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVQELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
KLPKNEPQAAGANSGRNRGVDLTETAQPASRSCCST
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaagtaggggtggtgcaacacgacccaatgggccgaacacaggcaacaagatctcc
cagttcaaattagtactcttaggggagtccgctgtgggaaagtccagtctcgtacttcgc
tttgtcaagggccagtttcatgaattccaagagagcacaattggagctgccttcctgact
cagacagtatgtttggatgacacgacagtcaagtttgagatctgggacacagctggtcag
gagcgctaccacagcctagcacccatgtactacagaggtgcccaggccgccatcgtggtc
tacgacataactaacaaagagtcctttgcacgagcaaagaactgggttcaggagcttcag
agacaagccagtccaaatattgtaatagcgttggctgggaacaaagctgaccttgcaaac
aaacgagcattggattttcaggatgcccagtcatacgcagatgataacagtttactgttc
atggaaacatcagcaaagacctctatgaacgttaatgagatattcatggctattgcaaag
aaattacccaagaacgagcctcaagctgccggagcgaacagtgggcggaaccggggagtg
gatcttacggagacggctcagcccgccagccgctcctgctgcagtacctaa

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