Salmo salar (Atlantic salmon): 106582154
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Entry
106582154 CDS
T04363
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106582154
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
106582154
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Motif
Other DBs
NCBI-GeneID:
106582154
NCBI-ProteinID:
XP_014020422
UniProt:
A0A1S3NYG8
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Position
ssa21:complement(26103091..26140299)
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AA seq
1072 aa
AA seq
DB search
MSDSLLKCILCTLPFILAFALLGIRTDAASGEGPILPDGQDLYFKTVGISPILSVPQSIV
HSPVLKVSHKDHGAIHRQKRNVLFPSGVKLCGQESVQQAIANHLSYFHLRVCQEMVWEAF
KIFWDRLPNQEEYQTWMSRCLNGTTTALEMGNNFSQSEEHLALVESFQRMSVTGLKSDAT
NSWLHMCSTQTPDTEQEAQEVIIEEAAAAEPSKEPTNDIEMEVLERVQLEQVVELSILLK
GERYSDALRDPASLHYQTLNQQFTDKIKDAVGGLPGFKSVAVLQFRLQKDAQGLDGVVVV
YAVTVEVEGEGVSSDQLDYLTLQSNLVENSYREVKERNYITDQHKDNIISDTTPVLDPDS
LQLYTVPSVTESFEPTAGIPEDYTNGSVEDILAVEMTPDALEVESEDVATGENDVIVVEE
SVTLPAELEVTIDGTSIEEEVLLLGNTVSTESPVLEDLPTDPTSPEQPEGATLPEPPLEI
EASGSGVHVPKDLPFQPEDMMEAPEPVGDLNVPENPPAIVTLPPDEPEEETNVVLAYPEI
PDYGEEVESLEEGPIIEVPVTEEDAVEEKVVAEVPDVSEISEEDFVEDEILLVVEAAPEA
THPTPLSAEKESPFTRVSDVIVGEEVTEATALDTAPEPEAEQEDQGVTPALIPAEYHPGP
DISITLELQTIDPVTDYDLVPFGGTNQTEEGSSGYPSGVVNGTDHSIAMPINPGRALMVF
FSLRVTNMMFSDDLFNKSSAEYKALEQRFLELLVPYLQSNLTNFQNLEILNFRNGSIVVN
SRMKFGRPLPRGVNNAVYLILEDFANTAYQTMNLAIDKYSLDVESGDQANPCKFQACNEF
AQCSVNRWSSEAECVCNAGYFSVEGLPCQSICELQTDFCMNDGKCDIIPGQGAICRCRVG
ENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASGVIFFLARTLRDQYDKDETEDPIRR
GESIPSLERATKYNPMYESEATTGYSHYYRRYPEAPVYSSASAEASTDFSSEEIRHIYEN
SELTKEEIQDRIRIIELYAKDRQFADFVRQHQTALETRRQSTLDKRRESAST
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctttattgaaatgtattttgtgtacacttccgttcattttagcgtttgca
cttttgggaataagaacagatgctgcatctggagaaggacctattcttcctgatggacag
gatctttatttcaaaacagttggcatttcacccattctgtcagttcctcaaagcatagtt
cattcacctgtcctcaaggtttcacacaaggaccatggagctatccaccggcagaagcgc
aacgtccttttccccagcggggtcaaactctgcgggcaggagagtgtgcaacaagccatc
gcaaatcacctcagctactttcaccttcgagtgtgtcaggagatggtgtgggaagccttc
aagattttctgggaccgcctcccgaaccaggaagagtaccagacctggatgagtcggtgc
ctgaacggcacgaccactgctctggagatgggcaacaacttcagccaatcagaggagcac
ctggccctggttgagagttttcagagaatgtcagtgacagggttaaaaagtgatgccacc
aactcatggttacatatgtgcagcacccagactccagacacagaacaggaggctcaagag
gtcatcatagaggaggctgcagcggcggagccttccaaagaacccacaaatgacatagag
atggaggtgttggagcgggtccagctggagcaggtggtggagctgagtatcctgctgaag
ggagagaggtacagcgacgctctcagagaccctgccagcctccactaccagacactcaac
cagcagttcactgacaagataaaggatgctgtggggggactgccaggctttaagagtgtg
gcagtgctgcagttcaggcttcagaaggatgcccaagggttggatggtgtggtggtggtc
tatgcggtgacggtggaggtggaaggggagggggtgagcagtgaccagctggactacctg
accctgcagtccaatctggtggagaactcctacagagaggtgaaggagaggaactacatc
actgaccagcacaaggacaacatcatcagtgatacaactccggtcctggaccctgactca
ctgcaactatatactgtgcccagtgttactgagtcctttgagcccaccgctggaataccc
gaggattacaccaacggcagtgtggaggacattttggctgttgagatgaccccagacgcc
ctcgaggtagaatctgaggatgtagcgacgggggagaatgatgtcattgttgtagaggag
agcgtgaccctccccgctgagcttgaggtgaccatcgatggcacaagcatcgaggaggag
gttctgctgttggggaacactgtgtctacagagagccctgtgttggaggacctccctaca
gaccctacctcccctgagcagccagagggcgctacgctccccgagccgcctctggagata
gaggcctctggttcaggtgttcatgtaccgaaggacttgccattccagcctgaggatatg
atggaagctcccgagccagtgggggacctcaatgtccccgagaatccccctgccatcgtg
actctgcccccagatgaacctgaagaggagactaacgtggtgctggcttatccagaaata
cctgactatggagaggaagttgagagcttagaggagggaccaatcatcgaggtgccagta
actgaagaggatgctgtggaggaaaaggtggtcgctgaagttccggacgtttctgagatc
tcggaggaggacttcgtagaagacgagatcttattggtcgttgaggctgctccggaggcc
acccaccccacccctctctctgcggagaaagagtcacccttcacccgagtctctgatgtc
atagtaggggaggaggttacagaggccacggccctggacacagccccagaaccagaggca
gaacaagaggaccaaggggtcaccccagctctcatacccgccgagtaccaccctggtcca
gacatttctatcactctggagctgcagacgatagaccctgtgacagactatgacctggtc
cccttcggagggacaaaccaaacagaggaagggagcagtgggtacccttctggagtggta
aatggtacggaccacagcattgccatgccaatcaaccctgggcgggctctgatggtgttc
ttcagtctgagggtcaccaacatgatgttctcagatgacctcttcaataagagctccgca
gaatacaaggccctagaacaaaggttcctcgagctgctggtcccctacctccagtccaac
cttactaacttccagaatctggagatcctgaacttccggaatgggagtatcgtggtcaac
agccggatgaagtttgggaggccgctgcctcgcggcgtcaacaatgcagtctacctgatc
ctggaagacttcgctaacacagcctaccaaactatgaacctggccattgacaagtactca
ctggatgtagagtccggtgaccaggcgaacccgtgtaagttccaggcgtgtaatgagttt
gcccagtgttctgtgaaccgctggtctagcgaggcggagtgtgtgtgtaatgctggctac
ttcagcgtggaaggtctgccctgtcagagcatctgtgaactgcagacagacttctgtatg
aatgacgggaagtgtgacatcatacctggacagggggccatctgcagatgtcgtgtaggg
gagaactggtggtaccgtggagaacactgtgaggagtatgtgtcggaacctctggtggtc
ggcatagcgatagcctctgtagcaggtttcctattggtggcttctggagtgatcttcttc
ctggcgaggacactacgggatcagtacgataaggatgagacagaggaccccatacggcga
ggggagagtatcccgtctctagagagggccactaagtacaaccccatgtatgagagtgag
gccacgacgggctacagccactactaccgccgctacccagaggccccggtctacagcagc
gccagtgccgaggcctccacagacttcagcagcgaagagatacgccacatctacgagaac
agcgaactgaccaaggaggaaatccaggacaggatacgcatcatcgaactctatgcaaag
gaccggcagtttgcagactttgtgcggcagcatcaaactgccctggaaacacgcagacag
agcacccttgataaacgcagagagagcgcgtccacgtag
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