Salmo salar (Atlantic salmon): 106582242
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Entry
106582242 CDS
T04363
Name
(RefSeq) interferon-induced guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106582242
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
URGCP_GTPase
RuBisCO_large_N
malic
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
106582242
NCBI-ProteinID:
XP_014020588
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All DBs
Position
ssa21:complement(<34969168..34973999)
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AA seq
533 aa
AA seq
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MDSPMCLVENADGELHVVPGAIKYLMGLNQQVIVVAVVGLYRTGKSYLMNKLAGKRKGFA
LGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVSELTERIKVNSSSAASSSHEDEEGGDAQFVQFFPNFVWAIR
DFTLLLEIDDRNVTEDEYLEHSLELRKGGGKKNLMYNLPRECIRNYFPSRKCFVFPTPTT
PANMPHLDSMDEADLCGSFRKVADTFCRFIFQESRTKTVKGGHKVTGRMLGHLVNTYVET
IAKGSVPCLENAVLAMAQIENQAAVDEGQVVYQRGMEEVKALFPVAMGQISAHHLRSDHQ
ATQAFMKRSFKDENGDFLKALAVAIAEHYADLLIQNEDASEKKCASLLEKLSAPMAQKIK
EGIYATPGGYELYCNHHDNMVAQYRAEPDKGVRAEEILEQFLKEKSLEKNSILQADKKLT
ENERKIHEEQEQRALAEQAVKMEAEKQHQLEKLIQERERSHQEGICQLEAKMV
NT seq
1601 nt
NT seq
+upstream
nt +downstream
nt
atggattccccaatgtgcctggtcgaaaacgccgatggcgagcttcatgtagttcctggt
gccatcaagtacctgatgggactgaaccagcaagtcatagtggtggcggtggtcgggctg
taccgcaccggcaagtcctacctcatgaacaagctggctggaaagagaaaaggttttgcc
ctgggagccaccatccaatccaagactaagggaatctggatgtggtgtgtgcctcaccct
gaaaaaagagaccacaccctggtgctgctggatacagaggggctgggggacgtggagaag
ggagattctaagaatgatgcctggatcttctccttggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatcaagccgtggagaacctccaatatgtgagt
gagctgacagagcggatcaaggtgaattcttccagtgcagcttcatcctctcacgaagac
gaggaaggaggggacgcccagtttgtgcagttctttccgaattttgtgtgggccatcaga
gatttcactctactactcgagatcgacgatagaaatgtcaccgaagatgagtatctggag
cattccctggaactcagaaaaggtgggggtaaaaagaacctgatgtacaacctcccacga
gagtgcatccggaactacttcccctcgcgcaagtgctttgtattccccacccctacaact
cctgccaacatgccccatctggattccatggacgaagctgacctctgtggaagcttccga
aaggttgcagatactttctgccgcttcattttccaggagagccgtacaaaaactgtcaaa
gggggccacaaagttaccgggagaatgctcggccacttggttaacacctatgtggagacc
atagccaaaggctctgtgccctgtctggagaatgcagtgctggccatggctcaaattgag
aaccaggctgctgtggatgagggccaggtagtataccagaggggcatggaggaggtgaag
gccttattccctgtggccatgggtcagatttcagctcatcacctccgctcagaccaccag
gccacgcaggctttcatgaaacgatccttcaaagacgaaaatggggatttcttgaaagcg
ttggcggtggccattgcagagcactacgctgaccttctcatccagaacgaggatgcctca
gagaagaagtgtgcgtcccttctggagaagctgtctgctccgatggcccagaagattaag
gaggggatctacgctacacctgggggatatgagctttactgcaatcaccatgacaacatg
gtggcacaataccgggccgagcctgataaaggagttagggctgaggagattcttgagcag
ttcctgaaggagaagagtctggagaaaaattccatcctacaagctgacaaaaaattgaca
gaaaatgagagaaagatccacgaggagcaagagcagagagccctggctgaacaggcagtg
aagatggaggcagagaaacagcaccagttagagaaactgatccaggagagggagaggagt
catcaggagggaatctgtcagctagaggctaagatggtcca
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