Salmo salar (Atlantic salmon): 106582297
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Entry
106582297 CDS
T04363
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106582297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106582297
04121 Ubiquitin system [BR:
sasa04121
]
106582297
03036 Chromosome and associated proteins [BR:
sasa03036
]
106582297
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106582297
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106582297
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106582297
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106582297
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106582297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_2
Ank_4
Ank_5
Ank_3
zf-RING_5
zf-RING_10
zf-RING_UBOX
DUF3108
Motif
Other DBs
NCBI-GeneID:
106582297
NCBI-ProteinID:
XP_014020707
UniProt:
A0A1S3NZA5
LinkDB
All DBs
Position
ssa21:complement(39374424..39379804)
Genome browser
AA seq
584 aa
AA seq
DB search
MDPDLCTDKGWTKTKEAVAHFRKLLLCSKCSKLMNEPVCLGVCEHMLCRSCAGPQAGVGC
VVCHSPAWVKDIQINRQLRNITELYGNLDSLLNPTGSDYSDALPITPAAQSDKSVLKHKK
NFKIWFSPRSRKVRCRVEKSAAVPLPEVGSGTVKAVPRPPETLPESKGKDLSVFNFNSSS
QDSGSSSPQRATNYEKKKKATKKTRNGGGGVRKPAAGGGQEPTTHKETKQNNKTQRLEAI
NQQWGFGGAREGDVREEEEQVTAEEGEHRSSKRVSFQSPATLPATVEPQKEDLPQGNAII
LSPSRSILKVVQPGDSIPLSEDQDGPSPHTTPSQLDKISAKQHSKPNEETTTKPDLPSPP
KRTPKRFSVEEKNISQSTPKKPKASPGQGRRPAVDRVALPAMHTSPSPAASPRQGRTSTS
TRRSREGEQQRGSSPCSPAPLGKRSPGRLSQNSPAVVKRNHKGETPLHLAAIKGDVATVT
ELLDQGADPNLKDNAGWTPLFYSNHLRLDWTPSRASCLTPLIYMLHEACNLGHQGVVEVL
VERGGVLLNTPGYKNDSPLHDAVRNGHTGIAMLLLQHGASQSVL
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgatctttgcaccgacaaaggctggacgaaaacgaaggaggctgtcgcgcat
tttcgaaaacttctgctgtgctcaaaatgttcaaaactgatgaacgaacctgtgtgcctc
ggagtttgtgaacatatgctttgcaggtcgtgtgctggtcctcaagctggagtgggatgt
gtggtgtgtcacagtcctgcctgggtgaaagacattcagatcaacagacaactcagaaat
atcacagaactctatggcaacctagactcactgctcaatcccactggctccgattactcc
gatgcccttcccattacaccagcagcacagtcagataaatctgtcttaaagcacaagaag
aacttcaagatctggtttagtccccgcagccgcaaggtgcgctgccgggtagagaagtct
gcggcggtgcctctaccggaggttgggagtgggactgtgaaagctgttccaagacctcct
gagacactacctgagtctaaaggcaaagacctgtctgtcttcaacttcaactcctcctcc
caagactctggctcctcctctcctcaaagggcgactaactatgaaaagaagaagaaagcg
actaagaagacgagaaatggtggtggtggtgtcaggaagcctgcagccgggggtgggcag
gaaccaaccacacataaagaaaccaagcagaataacaagacacagaggctggaggcaatc
aaccagcagtggggctttggtggagcgagagaaggagatgtcagagaggaagaagagcag
gtcactgcagaggaaggagagcacaggtcgagtaaaagagtttccttccaaagccccgcc
accctgcctgccactgtggagcctcagaaggaggatctccctcaggggaatgccataatc
ctcagccccagcagaagcatcctgaaggtggttcagccaggagacagcatcccactctct
gaggaccaggatggtccaagcccacacaccaccccttctcagctggacaagatatctgca
aagcagcactccaaaccaaatgaagaaacgactacaaagcctgacctgccctcccctcct
aagcgcactcccaaaagattctctgtggaagagaaaaacatctcacagagtaccccaaag
aaacccaaagcatctcctggccagggtagacgtccggcagtggacagggtcgcactccca
gccatgcatacctcgccctcccctgctgccagccccagacagggtcgaacctccaccagc
accaggagatccagagaaggagagcagcagcgaggcagtagcccgtgttccccagccccc
ctggggaagagatccccgggcagactgtcacagaacagcccagcggtggtgaagagaaac
cacaagggagagacaccactacacctggcagcaataaagggtgatgtagcgacagtgacg
gagctcctagaccaaggggctgaccccaacctgaaggacaatgctggatggacaccgctg
ttttactcaaaccaccttcggctggattggaccccctcacgggcctcatgtttgacaccc
ctgatctacatgttgcacgaggcatgtaacctgggccaccagggtgtagtggaggtgttg
gtggagaggggaggcgtgctgttgaacacaccaggctacaagaatgattctcctctacac
gacgctgtcaggaacggacatactggcatcgccatgctactgctgcagcacggggcttca
cagagcgtcttgtga
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