Salmo salar (Atlantic salmon): 106582337
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Entry
106582337 CDS
T04363
Name
(RefSeq) integrin beta-5-like
KO
K06588
integrin beta 5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04148
Efferocytosis
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106582337
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106582337
04148 Efferocytosis
106582337
09144 Cellular community - eukaryotes
04510 Focal adhesion
106582337
09142 Cell motility
04820 Cytoskeleton in muscle cells
106582337
04810 Regulation of actin cytoskeleton
106582337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106582337
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sasa04515
]
106582337
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106582337
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106582337
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
106582337
NCBI-ProteinID:
XP_014020798
UniProt:
A0A1S3NZI3
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Position
ssa21:complement(42701920..42802689)
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AA seq
804 aa
AA seq
DB search
MMWNPWQLYRTALGCMILEIFIHNDAQGLNVCMSGSAMSCEECLIIHPSCAWCAQEKFGS
VRTLTSRCDLRQNLQKRGCEAHHMESPSSSTTVVKSEPLSSKGSGPTQYDVIQIMPQKIS
LSLRPGDQTSFKVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMRKLTSNF
RLGFGSFVDKNMSPFSYTAHKYQDNPCNGYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQP
HDGECHMNEKNEYSGSTKMDYPSLALLGEKLAANNIYLIFAVTKRLYVIYKNFTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELTVWDQPEDLSLSFTATCQDGQPLPGLRKCAD
LKIGDTVSFNVSVDARGCPAPGTQQSFTIKPVGFKDRLEVSVDYRCDCGCTDQTQANSTH
CSSIGQYTCGICRCDPGYLGARCECQEGEAGSMYLSACRQAEGMQICGGRGECSCNQCFC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTDTSSCV
SDDGQICSGRGSCACGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFSSGRLSDN
QTCQRLCKDEIITVETLKTDDPNAVLCLYKTENECVMKFTYSEHANGMSVLTALKEPECG
AAPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARSRARYEMASNPLYK
QPISNDYVETDFSMYSKSYNGAAH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggaacccgtggcagttgtaccgtacagctcttggctgcatgattctggaaata
tttattcacaatgatgcacaaggtctgaatgtgtgtatgagtggcagcgctatgtcttgt
gaagaatgcctcatcatccatccaagctgtgcctggtgtgcgcaagagaagtttggcagt
gtgaggaccctgacgtcgcggtgtgacctgcgtcagaacctgcagaagaggggctgtgaa
gcccatcatatggagagtcccagtagcagcaccacggtagtgaagagcgaacccctcagc
tccaaaggctccgggcctacccagtatgatgtcatccagatcatgccccagaagatctcc
ctcagtctccgaccaggtgaccagacgtcattcaaagtgcaggtgcgtcaagtggaggac
tacccagtggacctgtactacctgatggacctgtctctgtccatgaaggacgacctggac
accatcaggaacctgggcaccaaactggccgatgagatgaggaaactcaccagcaacttc
agactgggctttggatcctttgtcgacaagaacatgtcccccttctcctacacggcccac
aagtaccaggacaacccctgcaatggatacaaactgttccccagctgtgtcccctccttc
gggttccgccacctcctctccttgactgacaaagtggatcgcttcaacgaggaagtgcag
aaacagatggtgtctcgcaacagggacgctccggagggcggcttcgatgccatcctgcag
gctgccgtctgtaaggaaaggataggctggaggaaggaggccttccacctgctggtgttt
gccacagacgatgtgcctcacctggccttggacggtaagctgggggggctggtccagccc
catgatggggagtgccacatgaatgagaagaatgagtacagtggctccaccaagatggac
tacccctctctggctctactgggagagaagctggctgcaaacaacatctatcttatcttc
gctgtgacaaaaaggctgtatgtcatttacaagaattttacagcactcatacctggaacc
acagtggagattctggatcaggactccaagaacatcatacaactcatcgttaatgcctac
aataacatccgatccaaggtggagctgaccgtgtgggatcaacctgaagacctcagtctg
tccttcactgccacctgtcaggacggacagcctctccccggcctcaggaagtgtgccgac
ctcaagattggagacacggtgtccttcaacgtgagtgtagacgccagaggctgccccgcc
ccaggtacccagcagagcttcaccatcaagcctgtgggcttcaaggatcgtctggaggtg
tctgtggactaccgctgtgactgtggctgcaccgaccagacccaggctaacagtacccac
tgcagctccattggacagtacacctgtggtatctgccgctgtgacccgggctacctgggt
gcccgctgtgagtgccaggagggcgaggctggcagcatgtacctgagcgcctgcaggcag
gctgaggggatgcagatctgtggtgggagaggggagtgcagctgtaaccagtgcttctgc
tatgagtcagagttcgggaagatctacgggaccttctgcgagtgtgatgacttctcctgc
gcccgacacaagggcatcctctgctcgggtcacggagagtgccactgtggagagtgtaag
tgccatgcgggctacatcggggacaactgtaactgttccactgacacctcatcctgtgtg
tctgatgacgggcagatctgcagcgggcggggcagctgtgcgtgtgggcgctgccagtgc
actgaaccaggggccttcggggacacctgcgagaaatgccccacctgccctgatgcctgt
ggcaccaagagggaatgcatcgaatgccggcttttcagctctggaagactgtccgacaat
cagacctgccagcggctatgcaaggatgagatcatcaccgtggaaacgcttaaaacagac
gaccccaacgctgtcctctgcctgtacaagacggagaacgaatgtgtgatgaagttcacg
tactctgaacacgccaacggcatgtcagtcctcacagctctcaaagagccagagtgtggc
gcagcgccggacgccatgacggtcctcctggcggtggtgggcagtatcctactggtgggc
atcgtgctgctagccatctggaagctggtcatcaccgtgcacgaccgcagagagttcgcc
cgcttccaaagcgcacgctcccgcgcacgatatgagatggcctccaaccccctgtacaag
cagcccatctccaacgactatgtagaaaccgatttcagtatgtacagcaagtcttacaac
ggagcagcccactga
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