Salmo salar (Atlantic salmon): 106582484
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Entry
106582484 CDS
T04363
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106582484
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106582484
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_12
SNAP
TPR_7
TPR_19
DUF5001
Motif
Other DBs
NCBI-GeneID:
106582484
NCBI-ProteinID:
XP_014021114
UniProt:
A0A1S3P0H4
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Position
ssa21:52223694..52254712
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AA seq
1265 aa
AA seq
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MMEPPEEKPIIYTMENKPIVTCAGDQALFTSLYTPLAQQLPREPMEWRRSYGRAPKMIHL
EANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEVYKASVRDNMMRWQGNLRLHGSA
DWVIVVVETSDTKKKNKTNILPRSSLVDKIRNDFCNKQNDRCVVLSDPLKDSSRSQESWS
TFLLKLRTLLLMSFTQNLGRFEEDMRTLREKRDQPGWSFCDYFMVQEELAFVFEMLQQFE
DALLQYDELDALFTQCVLNFGAGDGANWLGSFCSPVKSWTGLLLRRPIDMEKRDGIQSGQ
ASLLELRSYLFCRQCTLLIFLQRPWEVTQRALELLHNCVQELCLLEVSMLEGALDCWVFL
SCLEVLHRIEGCCDQAQLEANVSHTVGLWAYATDKLKSLGYMCGLVSEKGPLSLELNRTV
DLLAGLGDEKAETVHSLQSPYKKLKEALSSVEAFERHYLELSHAAVEMYRAIGRMRSARL
VGMSLAEFYMRKGNPEQAESFLQNALRSYVSEGWSLPVTHTRKQMAECQKLLGKTENYLQ
TSALLAGDANLTNEERIHFCQEILTFANQSTDSKAQKVALSMSSFAQLKQLQFRPATATV
HSGTALQVELCLRSLMPVAMPLEQLAASVHLNLEQGETIGKTRGPPRRPYPGTVLFPLGN
SSAMHPSAAGPSLELEEIQDRSPSDPRTLNSTGMVCKNTHLVMRRHDSSPSPDTPNLVSP
VPVVMDDGAKMLMSGDVTLLPGNNSIVFSVPSQELGTYTLRQLCATVGQVQFVLPHISPL
VQYEVYSQEPQLTVEPLTDQLLAGLTQRAKVRLQTGHYTVKKGDALQLTNIDSMLILTSS
SCPATILNSTAELVGESVLFIQSSDKVTCISLPPTPPYHTLEFQLEVLCVIPSDPVRPEN
QRLTNGEIRHRPRSYSHPDNHMTAINQRMSIDCPWSIYSTPISLTFYIPFKAKHSLLSAG
NRKYIQVCLQNVSDVTFHLMDQRLTDHESSLELQSLNTKAQQLVCSKQSVYCVWNVRWKE
NMPLCLQCVFSASFSSASEEVSAFKPYHYEFQLERVTTLYSVRAEIMPAAGQQNCHSGSL
CGLEMSITRLAEPEDDGGTEEKGQTETEEVCSTKLMYEVADSSSSWVVYGRSSGLVSMPA
DANANYKVQVELMPLFAGHLPFPDIKVFKYLPPSANSASQPDTDGCVENDTLYLLDRPLD
DQGDTASIRSQGSVHSVGSGEHQSRVLPMPRLEPFSPGQVFNHSQGCQVLVLPSTDDHVL
EINAT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcctccagaggagaagcccattatttacacaatggagaacaagccgattgtg
acatgcgctggggaccaggccttgttcacttctctctacaccccattggcccagcagctt
cccagggaaccaatggagtggaggaggtcgtatggacgagcaccaaagatgatccattta
gaggccaactttgtccagttcaaagaggaactcctccctaaagagggaaacaaagccctc
ctcactttccccttcctccatatctactggacagactgctgtgacacagaggtgtacaag
gcgtcagtcagggacaacatgatgaggtggcagggcaacctgcggctccacgggtcagct
gactgggtcatcgttgtcgtggagaccagcgacaccaagaagaagaacaagaccaacatc
ctgcctcgctcctccttagtggacaagatccgcaacgacttctgtaacaagcagaatgac
cgttgtgtggttctgtcagaccctctaaaggattcgtccaggtctcaggagtcgtggagt
accttcctgctgaagctgaggactctactgctgatgtccttcactcagaacctgggacgc
ttcgaggaggacatgcgcacactccgggagaaacgcgatcagcccggctggagcttctgt
gattacttcatggtacaggaggagttggcctttgtgtttgagatgctgcagcagtttgag
gatgctctgctccagtatgatgaactggacgcgctcttcactcagtgtgttctcaacttc
ggggctggagacggggccaactggctgggttccttctgctccccggtgaagagctggact
ggcttgctcctgcggcgccccatagacatggagaagagagatgggatccagagcgggcag
gctagcctgctggagctacgcagctacctgttctgtcgacagtgtaccctgctcatcttt
ctccagaggccctgggaggtgacacaaagagccctggagctgctgcataactgtgtccag
gagctatgcctgctggaggtgtctatgctggagggtgcattagactgctgggtcttcctc
agctgtctggaggtgctgcaccggatagaaggctgctgtgaccaggcccagctagaggct
aatgtctcccacactgtgggcctgtgggcctatgctactgacaagctgaagtctctgggc
tatatgtgtggtctggtgtcagagaagggtccgctgtctctggagctgaacagaactgtg
gacctgctggctggactgggggatgagaaggctgagactgtccacagcttgcagagcccg
tataaaaaactgaaggaggccctgtcttctgtggaggcgtttgagagacattatcttgag
ttgtcccatgctgctgtggagatgtacagggccatcggcaggatgaggtcagcacggctc
gttgggatgagcctggctgagttctacatgaggaagggtaatcctgagcaggcggagagc
ttcttgcagaatgctctgaggtcatacgtgtcagaggggtggagcctacctgtaactcac
accaggaagcagatggctgagtgccagaaactgctggggaagacagagaactacctgcag
acaagtgccttgttggcaggtgatgccaatctgaccaatgaggagaggattcacttctgt
caggagatcctgactttcgccaaccaatcaacagacagcaaggcccagaaggtggcgctc
agtatgagttctttcgcccagctcaagcagctgcagttccgcccggcaacagccacggta
cactctggcaccgccctgcaggtggagttgtgtctgcgcagcttgatgcctgtggccatg
cctctggagcagctggctgccagtgttcacttaaacctggagcaaggagagactatcggg
aagaccagggggccaccgagacggccatacccagggacggtgcttttccccctgggtaac
tcctcagcgatgcacccatccgctgctggtccttctctggagctggaagagatccaggac
cgcagcccctcggaccctcgtacactcaactccaccggcatggtgtgtaagaacacacac
ctggtcatgcgtcgtcatgacagcagcccgtcaccggacacgcccaaccttgtcagccca
gttcctgttgtcatggatgacggggcaaagatgctaatgagtggtgatgtcactctgctg
ccgggcaacaacagcattgtcttcagtgtaccaagtcaggagctgggtacctacacattg
cgtcagctgtgtgccacagtgggccaggtccagtttgtcctccctcacatctctcctctg
gtccagtatgaggtctattctcaggagccccagctcactgtggagcccctcacagaccag
ctgctggcaggcctcacccagagggcaaaggtcaggctgcagacaggtcactacactgtg
aagaagggagatgccctgcagctcactaacatagacagcatgctcatcctcacctcctcc
tcctgccctgctaccatccttaacagcactgcagagcttgtgggtgagagtgttctgttc
atccagtcgtctgacaaagtgacctgtatctctctacctcccacccctccctatcacacc
ctggagtttcagctggaggtactgtgtgtcatcccttctgacccagtccggcccgagaac
cagagactcacaaacggagagatacgccaccggccccggagctacagccaccccgataac
cacatgaccgccatcaaccagaggatgtctatagactgtccctggtccatctactccact
ccaatatcactcaccttctacatcccctttaaggccaagcactcactactatcagcaggg
aataggaagtacatccaggtgtgtctgcagaacgtgtcagatgtgacctttcacctgatg
gaccagaggctaacagatcatgagtcctctctggagctgcagtccctcaacactaaagca
caacagttggtgtgcagtaagcagagtgtgtactgcgtatggaatgtgaggtggaaggaa
aacatgccactctgtctacagtgtgtgttctctgccagcttctcttctgcttctgaggaa
gtctcagccttcaaaccctaccactacgagtttcaactggagagagtgacaacactgtac
agtgtgagggcagagatcatgcctgcagctggtcaacaaaactgtcattctggctccctc
tgtgggctggagatgtccatcacacgactggctgaacctgaggatgatggagggacagag
gagaaagggcagacagagacagaggaggtctgctccaccaagctcatgtatgaagtggca
gacagcagcagtagctgggtggtgtatggcagaagttcagggctggtgtccatgccagcg
gatgctaatgccaactacaaggtacaggttgagttgatgcccctgtttgctggccacctg
ccattccctgacatcaaggtgtttaagtacctacctccaagtgccaactctgccagccaa
cctgatacagacggctgtgtagaaaacgacaccctctacctgctggaccggcctctggac
gaccagggggacacggccagcatccgtagccagggaagtgtccactctgtgggcagcggg
gagcaccagtccagggttctccccatgcctcgcctggagcccttcagcccgggacaggtg
ttcaaccacagccagggatgccaggtcctggtgctgccctctacggatgaccacgttctg
gagatcaacgctacgtga
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