Salmo salar (Atlantic salmon): 106582498
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Entry
106582498 CDS
T04363
Name
(RefSeq) nucleoporin NUP53-like
KO
K14313
nuclear pore complex protein Nup53
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106582498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106582498
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106582498
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
106582498
NCBI-ProteinID:
XP_014021138
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All DBs
Position
ssa21:complement(52580887..52590388)
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AA seq
400 aa
AA seq
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MMEFQGTEPMTLGSPTSPKPGPGAQFLPGFLMGDLPAPVTPQPRSFGVMEMRSPFQAGGS
PPQPVVPTPKDKSGAPPVRSIYDDLSSPAIGMSPMGAHKQPFSMMQTPLSGYMAVTPGTA
SSLFSPASTGQQAKSTLSPAQVDPFFTQGDALSSEDHLDDTWITVFGFPPASASYILLQF
AQYGNITKHVMSNTGNWMHFQYQSKLQARKALSKDGKIFGEAIMIGVKPCIDKNVMESSD
RGSTSSGSVFTPPVRNGTPSHHVSTPRSSMRPLSVAYKASSSDYQGWSKSLVTQYLSWRM
VGLHSPGISPGGWLASTPPVSLLEDGWPPRSPGISPGGWLASPLPRYLSWRMVGLPAPPV
SLLEDGWPPRSPGISPGLSWKMVNHPATLQLQPNACLFFK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgatggaattccaaggcacagaaccaatgactctgggttccccaacatcgcctaaaccc
ggcccgggtgcccagttccttccggggtttttgatgggggatctgccagcacctgtcaca
ccccagcctcggtcatttggggtaatggaaatgaggtcaccatttcaagcaggtggctct
cccccccaacctgtagttcctacacctaaagacaagagtggggcccctccagtcaggagt
atctatgatgatctctcaagtcctgccatcgggatgtcccctatgggtgcacataaacag
cccttctcaatgatgcaaaccccactgtctggttatatggctgtcacaccaggaacagca
tccagtctatttagtcctgctagcaccggtcagcaggccaagtcaacattgtctccagcc
caagtagacccgttcttcactcagggagatgcactgtcttctgaagaccatctagatgat
acctggatcactgtatttgggttccctccggcctccgcgtcttatatcctgttgcagttc
gcccagtatggaaacataacgaaacacgtgatgtccaacactggtaactggatgcacttt
caatatcagtcaaaactccaagcaagaaaagctttaagtaaagatgggaagatttttggc
gaggctataatgattggtgttaaaccatgcatcgataagaatgtgatggagagctcagac
cgaggctctacctcctctggctcagtgtttactcctcctgtcagaaatggaacccccagc
caccatgtctctacacctcgttcctctatgaggcccctcagtgtagcctataaggcctcc
agcagtgactatcagggctggagtaaaagcctggtcacccagtatctctcctggaggatg
gttggcctccactcccccggtatctctcccggaggatggttggcctccactcccccggta
tctctcctggaggatggttggcctccccgctcccccggtatctctcctggaggatggttg
gcctccccgctcccccggtatctctcctggaggatggttggcctccccgctcccccggta
tctctcctggaggatggttggcctccccgctcccccggtatctctcctggactgtcctgg
aagatggttaatcaccctgcaacactacaattacaaccaaatgcttgtcttttttttaaa
taa
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