Salmo salar (Atlantic salmon): 106582501
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Entry
106582501 CDS
T04363
Name
(RefSeq) interferon-induced guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106582501
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
106582501
NCBI-ProteinID:
XP_014021144
UniProt:
A0A1S3P0K6
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Position
ssa21:complement(52752008..52772528)
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AA seq
623 aa
AA seq
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MDSPMCLVKNADGELCIEPEAIDYLMGLKQKVVVVSVVGLYRTGKSYLMNKLAQKRSGFA
LGATIQSKTKGIWMWCVPHPEKTDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNDAVEKLQYVNELTEMIKVKSTTDNEEEGEGTQFMQFFPNFVWTVRDFTLQ
LEIDGGEITPDQYLENSLQLKTGTSKKINDYNLPRECIRNFFPSRKCFVFPFPTIPVNMH
RLDSMDEAELSESFREVADTFCSFIYQESRLKTVIGGHTLTGEMLGHLVTTYVETIAKGY
VPCLENAVLAMAKTENQAAVDEGLAVYQKGMEDVKALFPVDINQLSDNHLRSETEATQAF
MKRSFKDENGEFLKSLVEAIGNQSSYLFKQNEDASETKCKALLENLSAQMDQGMKEGTYT
TPGGYELYCNHHDNIVAQYRAEPNKGVRAEEGLEQFLKGKSAESNSILQADKKLTKKEKK
LQAEKMKTAELEQEKAALNEKQAEMQRTIENNRISQEKYLKEMKEKMEKEMKQQQQEFNK
TLDRKMQEQKDLLEKGHKEKADLMRKENEEMKKRDELEREANTQNQKALLELFKQQAEEQ
NKQMRILIEELLNRPQYPPCNVM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaatgtgcctcgttaaaaacgccgacggagagctttgcatagaaccagag
gccatcgactacctgatgggactgaaacagaaagtcgtagttgtgtctgtggtcgggctg
tatcgcaccggcaagtcctacctcatgaacaagctggctcagaagagaagtggttttgcc
cttggagccaccatccagtccaagactaagggcatctggatgtggtgtgtccctcaccct
gaaaaaacagaccacactctggtgctgctggatacagaggggctgggggacgtggagaag
ggggattctaagaatgatgcctggatcttctccctggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatgatgctgtggagaagcttcaatatgtgaac
gagctgacagagatgatcaaggtgaagtctaccactgacaatgaggaggaaggagagggc
acccagtttatgcagttctttcctaattttgtgtggaccgtcagagatttcactctacag
ctcgagatcgacggcggagaaatcactccagaccagtatctggagaattccctgcaactc
aagacaggtactagtaaaaagatcaatgactacaacctcccgcgagaatgcatccggaac
ttcttcccctcacgcaagtgttttgtgttccccttccctacaattcctgtgaacatgcac
cgactggactccatggacgaggctgagctttctgaaagcttcagagaagttgcagatact
ttctgcagcttcatttaccaggaaagccgtctgaagactgttatagggggacacacattg
accggagagatgctggggcatttggtcaccacctatgtggagaccattgccaaaggatat
gtgccctgtctggagaatgctgtgttggccatggctaaaactgagaaccaggctgctgtg
gatgagggcctggcggtgtaccagaagggtatggaggatgtgaaggccttattcccagtg
gacatcaatcagctgtcagataaccaccttcgctcagagaccgaggccacacaggcgttt
atgaagcgatccttcaaagatgaaaatggggagttcttgaaatctcttgtggaggccatt
ggcaaccagtcctcctaccttttcaaacaaaatgaggatgcctcagagacgaagtgcaag
gcccttctggagaatctatctgctcagatggatcaggggatgaaggaggggacgtacacc
acaccgggaggctatgagctttactgcaatcaccatgacaacatagtggcacagtaccgg
gccgaacccaacaaaggagtcagagctgaggagggtctggagcagttcctgaagggaaag
agtgcagagtccaactccatcctgcaagctgacaaaaaactgactaaaaaagagaagaaa
ttacaagctgagaagatgaaaacagctgagctggagcaggagaaggcagcattgaatgag
aaacaggcagagatgcagcgcaccattgagaacaatcgcattagccaggagaagtacttg
aaggagatgaaagagaagatggagaaggagatgaagcaacagcagcaggagttcaacaag
acactggaccgcaagatgcaggagcagaaagatctcctggagaagggccataaggagaag
gctgacctaatgagaaaagagaacgaggagatgaagaagagggatgaattggaaagggag
gccaatacccagaatcagaaggctctgctggaattattcaagcagcaggctgaggaacag
aataaacagatgagaatattaattgaggagctcttgaatagaccacagtacccaccctgt
aatgtcatgtga
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