Salmo salar (Atlantic salmon): 106582632
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Entry
106582632 CDS
T04363
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6-like
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106582632
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106582632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
Chromo_MIT1
PSME4_C
Motif
Other DBs
NCBI-GeneID:
106582632
NCBI-ProteinID:
XP_014021343
UniProt:
A0A1S3P134
LinkDB
All DBs
Position
ssa22:complement(2064348..2178208)
Genome browser
AA seq
3075 aa
AA seq
DB search
MHFSKLSWRFCVLGNKCREKAQCSATDALTGECCPDAVTVKRNMKIQKKDKQMSTTHLQK
YTPATAASNATAQNAQTPFPRGTLGSKDQIRDLGGGQTNHCMANSKHPRMGEAGTSSASL
SPCAPASPLNSEEDDGGGGRWAKKKQKKKDKRGEPGSAWQHKGLERDMKPNKKREQKEGK
ELLLRSFKEPRKVKAPKEVKRGRKPKVQALPHPPSECKSAPSPPRQRGRKPRAQVFQGPV
PAEKKKKGKRKSEAVLQEAGGRENVAFLSTLAIGGEESIDPLDNTKRRSGRQVKRRKYNE
DLDFKVVDDDGETIAVLGTGRIPALNAATLTWQAEEPPEDEANIIEKILSVRTVKKEASP
EDTTEESEEFYVKYRNFSYLHCKWATLEELEKDPRIQQKIKRFRTKHAQMKHIFVEPNED
LFNPDYIEVDRVLEVAITTDTETGEEVTHYLVKWCSLSYEEATWELQEDVDPVKIREFEE
IKRIPEFKFVERPQPDKWQKLDKSKDYRNGNQLREYQLEGMNWLLFNWYNRKNCILADEM
GLGKTIQSITFLFEMFSMGLRGPFLIIAPLSTITNWEREFRTWTEINVIVYHGSQISRQM
IHQYEMYHKDQQGNVVLGGYKFHGVITTFEMIMADCPELKKIHWRCVVIDEAHRLKNRNC
KLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESLFLEEFGDLKTEEQV
KKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNMQKKYYRAILEKNFTFLAKGANQ
HNMPNLINTMMELRKCCNHPYLIKGAEEKILDSFRKTHSPDAWDFQLQAMIQAAGKLVLI
DKLLPKLIAGGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKV
DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLI
TRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGAQQMTKIEVEDLLRKGAYGALMDEE
DEGSKFCEEDIDQILQRRTQTITIETEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWAK
ITELEIDSKAEKESLVIDTPRVRKQTRHYNSFEDDELMEFSELDSDSEERPCRTRRFSER
NRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWQLAERDMEVLCRALLVYCVRHYMGD
DKIKSFIWDLITPAKDGHKQDLQNHSGLSAPVPRGRKGKKLKNQLSVPEMKHADWLVNCN
PEVVLQDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGETAAQSLEGIPASKLEVALPDID
YIEIPAGWWDAEADKSLLLGVHKHGYERYNAMRADSELCFLERVGMPDVTALSAEQSGGE
VVADLTDSACKSDDVKDDPECNPEEGGVEKVDNKDETSSSNDAMDKHDSVGQDTLSVEMV
QESFGQEGMELKGRPLWPAGPALTARLRRLITAYQRFMRREPLRHDFLLPEGLGAGLGTM
SWQLGEEIRRCTVAAAEPDPLFLEWQRRWVMSEQRWTRREQADFYRTVSSFGVVYDPEKK
TFDWIPFRSFARLERKTDESLERYFSSFVSMCRTACRLPPRKDEGPLDHNLFVEPITEER
AARTLYRIELLRKVREQVLRHPLLGPRLQLCRPSLYLPVWWECGKHDRDLLIGAARHGLS
RTDYYILNDPQLSFLEAHRNYVQKENHQGYQPSVHHAGMAPSPHHHPCCIYDTGLGQCHS
PQPPEYGPPAIPSSAIHFHSHPNVHGHPPEIVGTGPGGSLGMVSGPREGFLVCPPLDESL
ELASLQHEGLASDSLHGKSAKEAFNGFPFNSAQGGQSMLNSYGVQGELTSEQSADMDPII
SGKLRSDVLVGSSEENGLMAPLLELEQELQVPWESTDHTGTADVVGMFNEADPILGAPAL
DTEFLDTEELPGDGGREDGAGGVLDDCLGIPSSRSDPGEPLPSSFMLFKNIDVSEEEPAA
EHTNLSASPLPSYIPPPHLSLSHMTLHRHHHNQGDVEQPEEKLSDSDTVAHVPSPDEGEA
ERDVSFKFDKEEMSVDSPSLVGLEQGLDTSCIPCEDTLQEEPCYGMGMGSPVESCQVALE
RPGEETLERDTPLGPVEEGLLEEQVEEPLEISPMDSQEEEPVDGPLEDFCKDKAPEGPFT
GPLDQYDVEPEAAFEGPAEAESTLSEHTLPTVDATDTLPPSSSVPRPQPEPPLSPGVAGV
AQIKLEFPLDPESSESQSDILEPDSTVLTPKLEQTEVLMEVKDKIKEERPQTPASVVDSY
VEVAQFAVPMSMCEMPDSLQDAREPTIAQLLQEKALYSFSEWPKDRVIINRLDSICHAIL
KGKWPSSSQQYDSPSSLANTCVPNIVHQRAGFISARVQPSQSLNFNIPAPPVTHLPKYKS
RDAGECSQGDWRLTSLPLLQERLVAPPYLPELKRGRRAFEYKAEVLSKQCHTGENMPVTV
SNRGGALLLNGWQEAAMDLSKAGDLGIGGDAAATVGHMSHQVHPGARKLPATQGSVGKDK
AGILQAGLIHPVTGQIVNGNLRCDDGIMRRRRGRRRNVEAVDIGSVTSRGMHVQEKQGRV
EVTSHSAVSSTSSPPEHPPGTSTPTLSEVVAIDREAANNGLMEWLRQNPNCSMEVPTFAP
SPGSAILHSFVERPKQRRHRCKDPTKLDVNSLTGEERVPVVHRSTGRRLGGAMAPAIKEL
SRWLDANTEYCVAPDWADVVKHSGFLPEGKFTRILTEPVCREQGPRRRGRRPRSEMPKPL
LSESPMGPLCMNGGLIGSMDLVSLQNLRNVQGIPLTGLMRFPHGFAVSAGEDAKNGLSML
PMMLHGIHGAPHMFSVQGLMGLPPTCSASTSSSTAAVTTTAASSSAASSPSRGPGQASSS
TGAEGSGIQSGTERKREEKQQGAMGSHSIAAITTTTATSSSSGSHQAFNPFLIPGMSHGL
LYPHMFLPHGGVMALPGMPPADSSSSPKTKKKRTREEGVVVVVEAGSHSHLQTDSGPPKK
HSDGQTGESTADQARPEDREQMEDNIQEEGTGHDTYDPPEVNPKKSVEEESGTMEISLME
EEKLPEEESVSRGAE
NT seq
9228 nt
NT seq
+upstream
nt +downstream
nt
atgcatttttctaaactgtcatggcgtttttgtgtccttggaaataaatgcagggagaaa
gcgcagtgttcggcaactgatgctctgaccggtgagtgttgtccagatgcagtgacggtg
aagagaaatatgaaaatacaaaagaaggacaaacagatgtccaccacccacttacaaaag
tacactccagctacagcagcctctaatgcaactgcccaaaatgcacaaactccatttccc
aggggaaccctgggctctaaggaccagatcagggaccttggtggtggtcagaccaatcac
tgcatggccaactccaagcaccccaggatgggcgaggcgggcaccagctcggccagcctc
agcccctgcgcccccgcatcacccctcaacagcgaggaggacgatggagggggcgggcgg
tgggcgaagaagaaacaaaagaaaaaagacaagaggggtgagcctggcagtgcctggcag
cacaagggcttggagagagacatgaaaccaaataaaaagagggagcagaaagaagggaag
gagctgctactgcgcagtttcaaggagcccaggaaggtgaaggcaccaaaagaggtgaag
agagggagaaaacccaaggtgcaggccctgccccatcctccttcagaatgcaagagcgcc
ccctctcctcccagacagaggggccgcaaacccagagcgcaagtcttccaagggccggtc
ccagcggagaagaagaaaaagggcaagcggaaaagcgaggcagttctccaggaggctggg
gggagagagaatgtggccttcctgtccacgctggccatcgggggagaggagagcatcgat
cccctcgacaacacgaagcgtcgctcggggcgacaggtgaagcgcaggaagtacaatgag
gacctggacttcaaggtggtggatgatgacggggagactattgccgtgctggggacaggc
cgtatccctgccctcaacgctgccactctcacctggcaggctgaggagccccctgaagat
gaggcaaacattattgagaaaatcctgtcggttcgaactgtgaagaaagaggcgtccccc
gaggatacaactgaggagtcggaggagttctatgtcaagtacagaaatttctcctacctg
cattgtaaatgggcgacattggaggagttggagaaggaccctcgcatccagcaaaaaatc
aagcgattcaggactaagcatgcccaaatgaagcacatattcgttgagccgaatgaagac
ctctttaaccctgactacatagaagtggatagagttctggaggtggccatcactacagac
acagagacaggagaggaagtgacacactacttggtgaagtggtgctccctgtcctatgag
gaggctacatgggagcttcaggaagatgtggacccggtgaagattcgggagtttgaggag
atcaagagaatccctgaattcaaatttgtggaaagacctcagccagacaagtggcagaag
ctggacaaatccaaagactatcgaaacgggaaccagctgagagagtaccagctggagggc
atgaactggctgctcttcaactggtacaacaggaagaactgcatcctggctgacgagatg
ggcctggggaagaccatccagtccatcaccttcctctttgagatgttttccatgggcctg
cggggacccttcctcatcatcgcccccctttccaccatcaccaactgggagagggagttc
cgcacctggactgagatcaacgtcattgtctaccacggcagccagatcagccgccagatg
atccaccagtatgagatgtaccacaaggaccagcagggaaatgtagtgttgggcgggtac
aagttccacggagtgatcaccacctttgagatgatcatggccgactgcccggagctgaag
aagatccactggcgctgcgtggtcatcgatgaggcccaccgcctcaagaaccgcaactgt
aaactcctggagggcctcaagctcatgaacctggaacacaaggtcctcctgacaggcacc
cccctgcagaactcagtggaggagctctttagtctgctcaacttcctggagcccctacag
tttccctcagagagcctcttcttggaggagtttggagatctgaagactgaggaacaggtg
aagaagcttcaggccatcctgaagcccatgatgctgcggcggctgaaggatgacgtggag
aagaacctggcgcccaaggaggagaccatcatcgaggtggagctcaccaacatgcagaag
aagtactaccgggccatcctggaaaagaacttcaccttcctggccaagggggccaaccag
cacaacatgcccaacctcatcaacaccatgatggagctgcgcaagtgctgcaaccacccc
tacctgatcaaaggtgcggaggagaagatcctggatagcttcaggaaaacgcacagccct
gatgcttgggacttccagctccaggccatgattcaggcagcggggaagctggtgcttatt
gacaagctgctgccgaagctgattgctggcggccacaaggtgctggtcttctcccagatg
gtgcgctgcctggacatcctggaggactacctcatccagaggaggtacacctatgagcgc
atcgacggcagagtgcggggtaacctgcgccaggcagcgatcgacaggttctgtaaggtg
gactcggaccgctttgtgttcctgctgtgtacccgtgctgggggcctgggcatcaacctg
accgctgcagacacctgcatcatcttcgactcggactggaacccccagaacgacctacag
gcccaagctcgctgccaccgcatcggccagagtaaagcagtgaaagtgtacaggctgatc
accaggaactcctatgagagggagatgtttgataaagccagtctgaagctgggtctagac
aaggctgtgctgcaggacattaatcgcaagggcagcctcaatggggcgcagcagatgacc
aagattgaggtggaggacctgctgaggaagggggcgtatggcgcactgatggatgaggag
gacgagggctccaagttttgcgaggaggacatcgaccagatcttgcagcgccgcacccaa
actatcaccatcgagacagagggcaagggctccaccttcgccaaggccagctttgtgtct
tctggaaatagaactgacatttccctggacgatcccaacttctggcagaaatgggccaaa
ataaccgagctggagattgactccaaagcagagaaggagagcctggtgattgatacgcct
cgtgtgaggaagcagacgcgtcactacaactcgttcgaagacgacgagctgatggagttc
tctgagctggacagcgactcagaagagaggccctgtcgcacccgccgcttcagcgagagg
aacagacgctacctccgcgccgaatgcttccgcgtcgagaagaacctgctcatattcggc
tggggtcgctggaaggacatcctgacccacgggcgcttcaagtggcaactggctgagcgt
gacatggaggtgctgtgccgggcactgctggtctactgcgtgcgtcactacatgggcgat
gacaagatcaagagctttatctgggacctcatcacacctgccaaggatggccataaacaa
gacctgcagaaccattctggcctgtcggccccagtgcccaggggacgcaagggtaagaag
ctaaagaaccagctgagcgtgcccgagatgaagcatgcagactggcttgtcaactgcaac
ccagaggtagtgctacaggatgacagctacaagaaacacctcaagcagcactgcaacaag
gtacttctgagggtgaggatgctgtactacctcaaggctgaggtcctgggagaaactgct
gcacagtccctggagggcattcctgccagtaaactggaggtggcactgcctgatattgac
tacatcgagatcccagcaggctggtgggatgcagaggcggataagtctctcctcttagga
gtgcacaaacacgggtatgagcgatacaatgccatgcgggccgactcagagctatgcttc
ttggagcgggtgggcatgcctgacgtcacggcactctcagccgagcagagtggaggagag
gtggtggctgacctcactgacagtgcttgcaaaagtgatgatgtgaaagacgatcctgaa
tgcaatccggaggagggaggagtggaaaaggttgataataaggatgaaaccagctccagt
aatgatgcaatggataagcatgacagtgttggtcaagacacactctcagtggagatggtc
caggagagctttggccaggagggcatggagctaaagggtcgccctctgtggccggccggc
cctgcccttacggccaggctacgtcgcctcatcacggcctaccagcgcttcatgcggcgc
gagccactgcgccatgacttcctgctacctgaagggttaggggcaggcctggggacgatg
tcctggcagctgggggaggagattaggcgttgcacggtggccgccgccgaacctgaccct
ctcttcctggagtggcagagaaggtgggtgatgtcagagcaaaggtggacacggcgtgag
caagcagatttttaccgcaccgtgtcgtcattcggtgtggtgtacgacccggagaagaaa
acattcgactggattcctttccgctcctttgcccggttggagaggaagaccgacgagagc
ctggagagatacttcagtagctttgtgtccatgtgccgcaccgcctgcagattgcccccc
aggaaggacgaagggcctctggaccacaacctgtttgtggagcccatcacagaggagcga
gcagcacgcaccctctaccgcatcgagctgctgcgcaaggtcagggagcaggtgctgcgc
cacccactgctgggcccacgtctgcagctgtgtcggcccagcctctacctgcctgtgtgg
tgggagtgtggcaagcacgaccgcgacctcctgattggagcggcccgccacggcctcagc
cgcactgactactacatcctcaacgacccgcagctatctttcctggaggcccaccgcaac
tacgtccagaaggagaatcaccaaggctaccaacccagtgtgcaccacgcaggcatggcc
ccctcaccgcaccaccacccctgctgcatctatgacacgggcctcggccaatgccactct
ccccagccgccggagtacggtcccccagccatcccctcctcggcgatccacttccattct
cacccgaacgtccatggtcacccgccagagatagtgggcacgggccccgggggcagccta
ggtatggtgtctgggccaagggagggcttcctggtttgcccccctctggatgagtcattg
gaactggcatcactgcagcatgagggcctggcctcagattccctccatggcaagtctgcc
aaggaggccttcaacgggttccccttcaactcagctcagggcggccagagcatgctcaac
tcgtatggtgtgcagggggagctgaccagcgagcagtcggccgacatggacccaatcatc
tcaggcaagctgcgcagtgacgtgctggtgggctcctcggaagagaatggccttatggcc
cccttgctggagctggaacaggagctgcaggtgccctgggagagcacggaccacacaggc
acagcagacgtcgtgggcatgttcaacgaggctgaccccatcctgggggcaccagccctt
gatacagagttcctggacacagaggagctgccgggagacgggggaagggaggatggagca
gggggagtgcttgacgactgcctaggtataccctcatcccggagcgacccaggggagccg
ctgccctccagtttcatgctgttcaagaacattgacgtgagcgaggaggaacctgctgca
gagcacacaaacctctccgccagcccccttccttcctacatcccccctccgcacctgtca
ctgtcccatatgaccttgcaccgccaccaccacaaccagggtgatgtcgagcagccagag
gagaagttgagtgactcggacactgtcgcccacgtgcccagccccgacgagggggaggca
gagagggatgtgtcctttaagtttgacaaagaggagatgtctgtggacagtccgagtctg
gtggggctggagcagggcctggacacctcatgtataccatgcgaggacactctccaagag
gagccctgctatgggatgggaatgggctctccagtggagtcatgtcaggtggctctagag
aggccaggagaagagactttagaaagggacacgcccttagggccagtggaggaggggctt
ctagaggagcaggttgaagaacccttggagatatcgcccatggattcccaggaggaggaa
ccagtggatgggcctctggaagacttctgtaaagacaaggcaccagaaggaccattcaca
gggccgttggatcagtatgacgtagaaccagaagcggccttcgaggggcctgccgaagca
gagagcactttaagcgaacacacactccccactgttgatgcaacagacactctgccccca
tcctcctcagtccccaggccccagcctgagccaccactgtccccaggtgtggcgggagtg
gcacagatcaaacttgagttccctcttgacccagagagctctgagagccaatcagacata
ctggagcctgacagcactgtcctcacgcccaaactggagcagacagaggtgctgatggaa
gtgaaggacaagatcaaggaggagaggccccaaactccagcctctgtagttgacagctat
gtggaggtggcacagtttgcagtccccatgtccatgtgtgagatgcctgacagtctgcag
gatgcgcgggagcccaccatcgcccagctgcttcaggaaaaagccctctactccttctcc
gagtggccaaaggatcgggtgatcatcaaccgcctggacagcatctgtcacgccatcttg
aaggggaagtggccctcttccagtcagcagtatgactcccctagctctctggcaaacacc
tgtgtgcccaacattgtgcaccagagggctggcttcatttcagccagggtacagccatcc
cagagccttaacttcaacatcccagcccctcctgtcacccaccttcccaagtacaagtca
agagatgccggggaatgcagccagggagactggaggttgacatccttgcctctcttgcag
gagaggctggtggcgccgccctatttgcctgaactaaagcggggtaggcgtgcgtttgaa
tacaaggcagaggtgctcagtaagcagtgccacacaggggagaatatgcctgtaaccgtg
tcgaacagaggcggggcgctgttgctcaacggctggcaggaggcggccatggacctctcc
aaggccggggatctgggcattgggggcgacgcggcagccactgtaggccacatgagtcac
caggtccaccccggtgcccgaaaactgcccgccacgcagggttcagtgggaaaggacaag
gccgggatcctgcaggcaggtctcatccaccccgtcaccggtcaaattgtcaacggcaac
ctgaggtgtgacgacggaatcatgcgccggaggagaggcagacggagaaacgtggaggcg
gttgacattgggtctgtcacgagcagaggaatgcatgtgcaggaaaaacagggcagggta
gaagtcaccagccattctgcagtgtcgtccacctcctccccaccagagcaccccccggga
acctccacccccaccctgtcagaggtggtggccatcgacagagaggctgccaacaatggc
ttgatggaatggctgcgacagaatcccaactgtagcatggaggtgcccactttcgcaccg
tctcctggctcagcgattctgcacagctttgtggagcggcccaagcagcggcggcatcgc
tgtaaagaccccaccaagctggatgtcaactccctaacaggggaggagagggtgccagtg
gttcacaggagcactggccgcaggcttgggggtgctatggctccagcaatcaaggagctt
tcacgatggctggatgcaaatactgagtactgcgtagcacctgactgggcagatgtagtg
aaacactctggctttcttcccgagggcaagttcacccgcatcctcactgagcccgtgtgc
cgcgagcaggggccccgccgccggggccgtcgtccccgcagcgagatgcccaagcccctc
ctctccgagtctcccatgggcccgctctgtatgaacggcggcctgattggcagcatggac
ctggtcagcctccagaacctccgcaatgtccagggcatcccactcacaggcttgatgaga
ttcccccatggctttgctgtgtccgccggcgaagacgcaaagaatggtctgagcatgctg
cctatgatgctccacggcatacatggcgccccccacatgttcagcgttcaggggctgatg
gggttgccgcccacctgctctgcttccacctcctcctccacggctgcagttaccaccact
gcggcctcctcctcagcggccagtagcccctctcgaggccccggccaggcatcttcaagc
acaggggctgagggctccggcattcagtctggcacagagagaaagagggaggaaaagcag
caaggcgcgatgggcagccacagcattgcggccatcaccaccaccacagcgaccagcagc
agcagtggcagccaccaggccttcaaccctttcctcattccagggatgtcccatggactg
ctgtaccctcacatgttcctcccgcacgggggcgtcatggcgctgccaggcatgccgcct
gcagactcctccagcagcccaaagacgaagaagaaaagaacaagggaggaaggggtggtg
gtggtggtggaggcaggcagccacagccacttacagacggatagtgggcctccgaaaaaa
cacagtgatggccagactggggagagcactgctgaccaggcaaggccggaggacagggag
cagatggaggacaacattcaggaggagggcacgggacacgacacctatgatcctccagag
gtaaaccccaagaagagcgttgaagaggagagtggaacgatggagattagcttgatggag
gaggaaaaactgcctgaggaggagagcgtgtcaaggggggcagagtag
DBGET
integrated database retrieval system
