Salmo salar (Atlantic salmon): 106582669
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Entry
106582669 CDS
T04363
Symbol
gli1
Name
(RefSeq) GLI family zinc finger 1
KO
K16797
zinc finger protein GLI1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106582669 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106582669 (gli1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
106582669 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
FOXP-CC
DnaT
Motif
Other DBs
NCBI-GeneID:
106582669
NCBI-ProteinID:
XP_014021423
UniProt:
A0A1S3P1B2
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All DBs
Position
ssa22:complement(4880390..4909857)
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AA seq
1276 aa
AA seq
DB search
MDGINIKSLEERSEGDVASPSSTGTQDPLMGLLEGREDLDKEDKPEPEAIYETNCHWESC
SKEFDTQEQLVHHINNEHIHGEKKEFVCHWQECSREQRPFKAQYMLVVHMRRHTGEKPHK
CTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPY
VCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPGSSLTPGGQSGELLLE
KEETRHREDCKLLAPESALKSQPSPGGQSSCSSERSPLGSANNNDSGVEMNLNAAGSLED
LTALEDGGAGGGGEAGGRGQGMAGMGGTSAQALKRLENLKIDKLKQIRRPTPPGRCGRSS
KLPALTGCPGEMMGGMCTPSPLLSNRRVMELSNHELGGGPSGMPPPISDRRGSGTSSLSS
AYTVSRRSSMVSPYLSSRRSSEVSQLGGGGGGFLGPDQGGGDPLSPETSRRRGPCHGVGG
GGGLPGLPCLTPAQQYSLKAKYAAATGGPPPTPLPSMEQGAGTPGRRGVLLSEYQGQPLP
AFLQQGGQRRHSANTGEYGTGVIYPHQAPGNATRRASDPIRSTGDPQALPKVQRFNSLNN
VAMMGRRNALQHCGSDANIARHMYSPRPPRITENVLMEAMATDYHGGTMDARNHCMMLSP
GERGFLGYQSHHMGGPTSLLSPSHDSLGCPEQGYQTQGQMFMQGGHHQGTSRGPGQGQMG
QGGPIHPEGMSKILLQQAEYSMSTCQLSPSGPHYPSLDQGGPDVGTGAWIESSQVQTTHE
VLQTEMQYQDQGSMQGQTQGLYTQEPDGGHKLIIKPEQQQYHPALANPDACQKQLHQHQQ
QRPHPGQTPMPMRPMSSQSGYPQQGQPGQGMMRTTNPSCDFHGGGMENQNQASMQQGKQQ
GSFPQSGGISLGSAALGAGGRSQTPMMQVKEMMVRNYVQSQQALMWGQEQDQRGIGVDGK
PLPLSDSMDMTGQQVAMMQQQHSPQHQHNLYPNPGSSYPGYPTNQNLMSSPAHNRVPSSG
SSIPPTEVPMTGLPGGPGSCYGQDMGAPVVPRPPQCRKPLSRQNSLQSQGGGAYLGSPPH
LSPVHSTSSPRRVVRLPPVQGHMTPHQTHQEIFPPLNNINNNMYYSGQIHLQHSDMDKQQ
IQQISHPHQDPTQTGPCLNQHQHQQHMVTHMDHQGNKSASLAYLHESTPISNALENLDLD
NAQIDFTSIIDDPDPSSFSPINPPLHGGSSQTSSRLTTPQTSITMPPSGLPNMAVGDMTS
MLTSLAGENKYLNTLS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggatgggatcaacattaagagtctggaggagaggtctgagggtgacgtggccagccca
tcctctactggcacacaggatcctctgatgggtctgctggaggggcgggaggatctggat
aaggaggataaaccggaaccagaggccatctatgagaccaactgccactgggagagctgc
agcaaggagtttgacacgcaggagcagctagtccaccacataaacaacgagcacatccat
ggagagaagaaggagtttgtgtgccactggcaggagtgttccagggagcagagaccattc
aaagcccagtacatgctggtggttcacatgcgcaggcacacaggagagaaaccgcataag
tgtacttttgagggctgtaataaggcctactctcgcctggagaacctgaagacccacctg
cggtctcatacaggggagaagccgtatgtctgtgaacacgagggatgcaacaaagccttc
tccaacgcctcagacagagccaagcaccagaaccgcacacactccaacgagaagccgtat
gtgtgtaagatccctgggtgtacgaaacgctacacagaccccagctcactgcggaagcac
gttaagacagtccacggccctgaggctcacatcactaagaagcaccgaggggacactggg
ccccggccgcctggctcatcactgacccctggtggacagtctggtgaactgctgctagag
aaagaggagactagacacagggaggactgcaaactgctggcgcctgaatctgctctgaag
tctcagcccagtccgggtggccagtcatcctgcagtagcgagcgttctccgctggggagc
gcgaacaacaacgacagtggtgtggagatgaacctgaacgcagcagggagtctggaggac
ctgaccgctctggaggacggaggggcgggaggaggaggggaagctgggggaagagggcag
ggcatggcagggatggggggcacgtcggctcaggccctaaagagactagagaacctgaag
atagacaagctgaaacagatcagaaggcccactccacccggacgctgtggtaggagtagc
aaactaccagcactcacaggttgtccaggagagatgatgggagggatgtgtactccctcg
cccctcctctccaaccgccgcgtcatggaactgtccaatcacgagctgggcggcggaccc
tctggcatgcccccccctatcagtgaccggagggggagtggcaccagcagcctaagctct
gcctacacagtgagccgtcgttcttccatggtgtccccctacctctccagccggcgctcg
agcgaggtctcccagttaggaggaggtggaggagggttcctgggtcctgaccagggagga
ggtgaccccctctcccctgagaccagccgccgaagagggccctgccatggtgttggaggg
ggaggagggttgccaggtctgccttgtctaacacccgctcagcaatacagcctgaaggct
aagtatgcagcagcaactggcggcccaccccctaccccgctgcccagtatggaacaggga
gcagggacacccgggagacgaggagtgctcctcagcgagtaccagggtcagccgctacct
gcgttcctgcagcaggggggtcagaggagacacagtgccaacactggggagtatggcact
ggggtcatctacccccaccaagccccggggaatgccacccggcgtgccagcgaccccatc
cgctccaccggcgacccacaggcccttcccaaggtgcaacgcttcaacagcctgaacaat
gtggccatgatgggccggaggaacgccctgcagcattgtgggtcagacgccaacatcgcc
cgccacatgtactcgccgcggccacccagaattacagaaaatgtcctgatggaggccatg
gctacagactaccatggaggaaccatggatgccaggaaccactgcatgatgctttcccca
ggagagagaggcttcctgggctaccagtcccaccacatgggggggcccaccagcctgtta
tcacccagccacgacagcctgggatgcccggagcagggctaccagacacagggacagatg
ttcatgcagggtgggcaccaccagggcacctccagaggaccaggtcagggccagatgggg
caggggggacccattcacccagaggggatgtcaaaaatcttgctgcagcaggctgagtac
agtatgagtacctgccagcttagtccctctggaccacactaccccagcctggaccagggt
ggccccgatgtaggtacaggggcctggatagagagcagccaggtccagaccactcatgaa
gttcttcagacggagatgcagtatcaggaccagggctctatgcagggccagacacagggt
ctgtacacccaagagcccgatggcggacacaaactgatcatcaaaccagaacagcagcag
taccacccagccctagccaacccagatgcctgccagaagcaactccaccaacaccagcag
cagaggccccatccagggcagacacccatgcccatgcgacccatgtcctcccagagcggt
tacccccagcaggggcagcctggccagggcatgatgaggaccaccaaccccagctgtgac
ttccatggaggaggcatggagaaccagaaccaggcctccatgcagcaagggaagcagcag
ggttccttcccccaaagcggaggcatcagcctggggtcggctgcgctgggtgctgggggt
cgctcccagacacccatgatgcaggtgaaggagatgatggtgaggaactatgtgcagtcg
cagcaggctctgatgtggggtcaggagcaggaccagagggggataggagtggacggcaaa
cctcttcctctgtcagacagcatggacatgacaggacagcaggtggccatgatgcagcaa
cagcatagtccccaacaccaacataatctctaccccaacccaggctccagctacccaggc
taccctaccaaccagaacctgatgagctccccagcacacaaccgagtccccagctctggc
tcctccatccccccgacggaggtacccatgacgggtctgcctggaggcccagggtcctgc
tacggccaggacatgggggcccctgtagtcccaagacccccccagtgccggaagcccctc
agcaggcagaatagtctccagtcccagggaggtggagcgtacctgggcagtcctccccac
ctcagcccagtccactctacctccagccccagacgtgtggtccgtctgccccctgtccag
ggccacatgaccccccatcagacccaccaggagatcttccctcccttaaacaacatcaac
aataacatgtactactctggccagatccacttgcagcactctgacatggacaagcagcag
atccagcaaatcagccaccctcaccaggacccaactcagaccgggccctgcctcaatcag
caccagcaccaacagcacatggtaacccacatggatcaccagggcaataagtctgcgtcc
ctagcctaccttcatgagtcgacccccatctccaatgctctggagaacctagatctggac
aacgcccagatagactttacctccatcatcgatgacccagacccctcgtcattcagcccc
atcaaccctcctctccatgggggttcatcccagacctcgtcccgcctcaccacccctcag
acatccatcaccatgcccccctctgggctccctaacatggctgtaggagacatgacctcc
atgttgacatctctggccggagagaacaagtaccttaatacactgtcttag
DBGET
integrated database retrieval system