Salmo salar (Atlantic salmon): 106582801
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Entry
106582801 CDS
T04363
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82-like
KO
K14962
COMPASS component SWD2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106582801 (WDR82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106582801 (WDR82)
03036 Chromosome and associated proteins [BR:
sasa03036
]
106582801 (WDR82)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106582801 (WDR82)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
106582801 (WDR82)
COMPASS/SET1 complex (yeast)
106582801 (WDR82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
VPS8_N
MinC_C
Motif
Other DBs
NCBI-GeneID:
106582801
NCBI-ProteinID:
XP_014021714
UniProt:
B5X8X9
LinkDB
All DBs
Position
ssa22:complement(11634489..11638310)
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AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILVSTNGGALRLLDAFKGAVMHSFGGYNNSKA
VTLEASFTPDSQFIMIGSEDGKVHVWNAESGMKVAVLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggacaatgtgctgcggagcttcagggttgcaaaggttttccgggaaaat
tcagacaaaatcaactgttttgatttcagctcaaacggcgaaaccatcatttctagcagc
gacgacgactccctagttttatacgactgccaggagggaaaacccaagcggaccctctat
agtaagaagtatggagtggatctcatcaggtacacacatgcagccaacactgtggtgtac
agctccaacaaaattgatgacactatccggtacctctccctccatgacaacaagtacatc
cggtacttccccggacacaacaaaagagtgacgtctctctccatgtcccctgtggatgac
acgtttatctcaggatctttagacaagacaatccggctatgggatctgcggtctccaaac
tgccagggcctgatgcacctacaggggaagccagtttgctcatttgatccggagggtctg
atctttgctgctggcgtgaactcggagatggtcaaactgtacgacctgcggtcctttgac
aagggtccttttgctaccttcaagctacagtacgaccgtacgtgtgagtggacaggactc
aagttcagcaacgatgggaagctcatccttgtctcaaccaatgggggtgctctccgcctc
ctcgacgccttcaagggagctgtgatgcattcctttgggggctacaacaacagcaaagct
gtgacgctggaggcctccttcactcctgattctcagttcattatgattggctctgaggat
gggaaggtccatgtttggaatgcagagagtgggatgaaggtggctgttctggatgggaag
cacacgggtcctgtcacctgccttcagttcaaccccaaattcatgacttttgctagtgct
tgctcaaacatggcattctggctgcccaccattgacgattga
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