Salmo salar (Atlantic salmon): 106582849
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Entry
106582849 CDS
T04363
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106582849
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106582849
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106582849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
Sina_ZnF
PDZ_Tricorn
U-box
RING_XB3-XBAT31
zf-TRAF
zf-RING_6
TRAF2_zf
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
106582849
NCBI-ProteinID:
XP_014021848
UniProt:
A0A1S3P2I7
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All DBs
Position
ssa22:13654002..13783467
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AA seq
1054 aa
AA seq
DB search
MGFELDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLIMKLDIKCDNHARGCEKVVKLQHLAEHAEMCDYSPAKCRNKGCNEVF
NLKDMDAHMRESCDCRPVGICENGCGLMLTHKEQKLDTHCCLKALKAHNSALHVKVVSLD
KEFKKQSLKSSKREKSLLAQLSAVHNELQMTALKYQKKFTEYSARIDSLTKTLAPPCKGG
ETKNVTAILHREGGSLGFNIVGGRPCADDHDGPSNEGIFVSKIVENGPADKEGGLQIHDR
IMEVNGKDLSKVTHDQAVEAFRTAKEPIMVQVLRRAPRPKPSSPASDTQVVDISTQTDIT
FQHIMALTKLPAAAPTVAVLEQYLMPEEHSPGHEYFDPNDFLEGMQQEMEREELEYEEVD
LYRANIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQINGIEIQNR
EDAVALLTSEENQNVCLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTAS
MLQQKKREEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDESSEQENLGDDQTAASNTLG
SCSRRKLAYSQDTLGSVDLPFSGESFISADYDHADFLGIPADECERFRELLELKCQVRSA
GGPQELYCQSAGAGGAEEGVDKELELLNEELRSIELECLNIVRAHKMQQLREQYRESWML
HNSGFHNYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRR
GAENQGESGASSSAGPNSRILKPLLSPVQEAGDPSRIRPSSSKESECGLQVEGKERKLGE
STHKLAQPRSLYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSLVSRGDPVNPGD
MLDPKMEWKVKIRSDGTRYITKRPVRDKLLKERALRIHEERSGMTTDDDAISELKMGRYW
SKGERKQHAVRAKEQKQRREFMKQSRADCLKEQASLDDDKKEPNIIELSHKKMMKKRNKK
IFDNWMTIQELLTHGAKSPDGTRVYNSLLSVTTV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgagttggatcggtttaaaggggctgtggacccagattttaaatgcaatttg
tgtaataaagttcttgaagacccgctcactactccgtgtggtcacgtcttctgcgctggc
tgtgtgctgccttgggttgtccagcaaagcagttgccccgtcaaatgtcaaaggatctcc
acgaaagagctgaaccacgttctccctctgaaaaacctgattatgaagctggacataaag
tgtgacaaccatgccagaggctgtgaaaaagtggtgaagctgcaacatctggcagagcac
gccgagatgtgcgattactcgccggcaaaatgcaggaataaaggatgcaacgaggtgttc
aatctgaaggacatggatgcacatatgcgcgaatcgtgtgattgcagaccggtcgggata
tgcgaaaatggatgtggattgatgctcacccacaaagagcaaaaactagacacccattgc
tgtttgaaagccctgaaagcacataatagtgcattgcacgtgaaggtggtcagcttggac
aaagagttcaagaagcaatctttgaaatcgagtaaaagagagaaatctcttcttgctcaa
ctctctgctgtgcataatgagctacaaatgacagcactgaagtatcagaagaaattcact
gaatacagtgcaaggatcgactcgctgactaagacccttgctcccccgtgcaagggtggg
gagaccaaaaacgtcacagccatccttcatcgggagggcggttctctgggcttcaacatc
gtgggaggaagaccatgtgcggacgaccatgatggcccttcgaatgaagggatctttgta
tcgaagattgttgagaacggaccagcagacaaggagggaggccttcagatccacgacaga
ataatggaggtgaatgggaaggacctgtccaaggtcacccatgaccaggcagtggaggcc
ttccgcacagccaaggagcccatcatggtccaggtacttcgccgggccccccgccccaaa
ccctccagccctgcctcagacacccaggtggtggacatcagcacccaaacagacatcacc
ttccaacacatcatggccctcaccaagctgcctgccgccgcccccaccgtggctgtgttg
gagcaatacctcatgcctgaggagcattcccccgggcacgagtactttgaccccaatgat
ttcctggagggcatgcagcaggagatggagcgagaggagctggaatatgaggaagtggat
ttgtacagagccaacatccaggacaagcttgggttgaccgtctgctacaggactgatgat
gaggacgagactgggatctacgtcagtgagattgacccaaacagcatcgctgcgaaggat
ggcaggatcagagagggagatagaattatccagatcaacgggattgagatccagaaccga
gaggatgctgtggctttgttgaccagtgaggagaatcagaatgtgtgtctactggtggcc
agaccagagattcagctggatgagggctggatggatgatgacaggaatgacttcctggat
gacctccacatggacatgctggagcagcagcaccaccaggccatgcagttcaccgccagc
atgctgcagcagaagaagcgtgaggaggatggtggaacgactgacacagccaccctgttg
tccaaccaccacgagaaagacagtggggttggccgcaccgacgagagcacgcgcaacgac
gagagctctgagcaggagaacctgggggacgaccagaccgcggcctccaacacgctgggc
agctgcagccgcaggaagctggcctacagccaggacaccctgggaagcgttgacctgccc
ttcagcggtgagtccttcatctctgcagactacgaccacgctgacttcctgggtatcccc
gccgacgagtgtgagcgcttccgagagctcctggagctgaagtgccaggtgaggagcgcg
gggggcccccaggagctgtactgccagagtgcaggggctggaggggccgaggagggggtg
gacaaggagctggagctgctgaacgaggagctacgcagcattgagctggagtgcctcaac
atcgtccgggcccacaagatgcagcagctgagggagcagtaccgtgagtcctggatgctg
cacaacagcggcttccacaactacaacaccagcatcgacgcgcgccgccatgagctctcc
gacatcacagagctgcccgagaagtcagacaaggacagctccagcgcctacaacaccggt
gagagctgtcgcagcacccccctcaccctagagctgtccccagacaactccctccgcagg
ggggcagagaaccagggcgagtctggggcctcaagcagcgcagggcccaacagcaggatc
ctcaagcctctgctgtcccctgtccaggaggccggtgaccccagcagaatcaggccctcc
tcctctaaggaatctgagtgtggcctgcaggtggaggggaaggagcgtaagctgggagag
tctactcacaagctggcccagccccgctccctgtacaaacacgcccacatcccggcccac
gcccagcactaccagagctacatgcagctgatccagcagaagtctgccgtggagtacgcc
cagagccagatgagcctggtcagtctggtcagccgcggtgaccccgtgaaccccggagac
atgctggatcccaagatggagtggaaggtgaagatccgcagcgacggcacgcgctacatc
accaagaggcccgtcagggacaagctgctgaaggagcgcgccctgcgtatccacgaggag
cgcagcggcatgaccacggacgacgacgccatcagcgagctgaagatggggcggtactgg
agcaagggggagaggaagcagcatgcggtgcgcgccaaggagcagaagcagcgccgcgag
ttcatgaagcagagccgcgctgactgcctgaaggaacaggccagcctggacgacgacaag
aaggagcccaacatcatcgaactgagccacaaaaagatgatgaaaaagaggaacaagaaa
atctttgacaattggatgactatccaggaacttttgacccacggtgctaagtcgcctgac
ggcacgcgagtgtacaactccctcctgtccgtcaccactgtgtag
DBGET
integrated database retrieval system
