Salmo salar (Atlantic salmon): 106583060
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Entry
106583060 CDS
T04363
Name
(RefSeq) integrin beta-7-like
KO
K06590
integrin beta 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04514
Cell adhesion molecules
sasa04672
Intestinal immune network for IgA production
sasa04810
Regulation of actin cytoskeleton
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106583060
04514 Cell adhesion molecules
106583060
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106583060
09142 Cell motility
04820 Cytoskeleton in muscle cells
106583060
04810 Regulation of actin cytoskeleton
106583060
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
106583060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106583060
04515 Cell adhesion molecules [BR:
sasa04515
]
106583060
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106583060
Cell adhesion molecules [BR:
sasa04515
]
Integrins
Integrin beta subunits
106583060
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_TEN
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
106583060
NCBI-ProteinID:
XP_014022315
UniProt:
A0A1S3P431
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Position
ssa22:complement(27848029..27857082)
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AA seq
767 aa
AA seq
DB search
MVGFFLLGTFMLYCVGQIQIQGVPQICVSQPSCSACLRSPGCAWCKHKDFLKSGESTERR
CDTAESLRTRRCEQTDIINPQSELVFLKNNELSSDPDSVVQLKPQNLLFKLRVGVPQTFS
VSFKRAEGYPIDLYYLMDLSFSMRDDLDTIKNLGQEILSTLKNVTKKVRIGFGSFVDKVA
LPYVSQVKDKKNNPCPSRLYTCQPAFSFQNILGLTQDVAEFKTRVSNQIISGNLDSPESG
FDAIMQAAVCQGVIGWNNVTRILVYTSDDTFHIAGDGRLAGIFEPNDGKCHLNGSGFYDG
TKYDYPSVGQLARVLAANNIQLIFAVTEDSVAAYKALSKLIPQSVLGVLKNDSSNVVQLI
LEAYNNLSSTILLEHHGAPSGLDVTYRSHCTPAEGDNTPWQRKGECMNVKLNQQVDFTVS
LNISTSEGECLKEKKQFFLKLQGISETLKVSVETLCDCDCHDREQQSTHCNEKGTLNCGI
CSCDEDHLGQRCECDRPKDMISADSMDTTCRQDSSSLLCSGHGSCECGICVCQGTHHEDF
CQCDDNSCDRHNNMLCGGNGQCDCGTCKCHANYNGSACDCSTLTDQCRTAGKLCNGQGTC
QCNQCQCNNDFFGMNCSKIADACAKFLACVTCELANKESDGLKSNCSRPCGSVKSTWVEG
PQEFPCREDTISYKVELFPDGNILVLYADLPRSVDKTYVIIGSSVSSIIFIGIAVILISW
LMLEFHYRREYDSFLKATETVVWKNIENPLFQDATTIVMNPIHIQED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggttggcttctttctattaggaacctttatgttgtactgtgtgggacagatccaaatt
caaggggtcccccaaatatgtgtgtcccagccctcatgttcagcttgcctgaggagccct
ggatgtgcctggtgcaaacacaaggacttcctgaagtctggggagtccactgagcggagg
tgtgacactgctgagtctctgaggaccaggcgctgtgagcagacagacatcatcaacccc
caatcagaattggtcttcctaaagaacaatgagctcagcagcgacccagacagcgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagtcggagtccctcagaccttcagt
gtgtcattcaagagagccgagggctaccccatagacctgtactacctgatggatctgtcc
ttctccatgagggacgacctggataccatcaagaatctgggccaggaaatcctctctacg
ctaaaaaacgtcaccaagaaggtccgcataggctttggctcgtttgtggacaaggtggct
ctgccgtatgtcagccaggttaaggacaagaagaacaacccctgccccagccgcctgtac
acctgtcaacctgccttcagcttccagaacattctgggactaacccaagacgtggccgag
ttcaagaccagggtcagcaaccagatcatctctggaaacctggactcccccgagtctggc
tttgacgccatcatgcaggcagctgtctgccagggtgtgattggttggaacaatgtcacc
cggatcctggtttacacgtcagatgacaccttccacattgccggggacggcaggctggct
gggatattcgaacctaatgatgggaagtgtcatctcaatggcagcggcttttacgatggc
actaaatatgactacccatcggttggccagctcgccagggtcctggcagccaataacatc
cagctcatctttgctgtcaccgaagacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtgctgggagtcctgaagaacgactcaagcaacgtggtccagctcatc
ttagaggcctacaataacctgtcctccactatcttattggagcaccatggagctccctca
ggtctggacgtgacctacagatcccactgcacccctgcagaaggggacaacaccccatgg
cagaggaagggcgagtgcatgaacgtcaagctcaaccagcaggttgacttcacagtgagt
ctgaatatttcaacgtctgaaggagaatgtctgaaggagaagaagcagtttttcctcaaa
ctgcagggcatcagcgagaccctgaaggtctccgtggaaaccctgtgtgactgtgactgc
catgacagagaacagcagtccacacactgcaatgaaaagggaacgctcaactgcggaatc
tgcagctgtgacgaggatcacctgggtcagaggtgtgagtgtgaccggcctaaggacatg
atctctgctgactctatggacacaacatgtcgccaagacagctcctcgctgctatgcagc
gggcacgggagctgtgagtgtggcatatgtgtgtgccagggcacccaccatgaggatttc
tgccaatgtgatgacaacagctgtgaccgccacaacaacatgctctgcggtggaaatggg
cagtgtgactgtggaacatgtaagtgtcatgccaactacaatggctctgcgtgtgactgt
tccaccctcaccgaccagtgcaggactgctgggaagctgtgcaatggccagggaacatgc
cagtgtaaccagtgccagtgcaacaacgacttctttggcatgaactgttcaaagattgct
gatgcatgcgcaaaattcctggcctgtgtgacgtgtgaattggccaataaggaaagtgac
ggcctaaagagtaactgtagccgaccatgtggctcagtcaagtccacttgggttgaggga
ccccaggagttcccctgcagagaagacaccatctcctacaaagtagagctgttccctgac
ggcaacatcctggtcctctacgcagatctgccccgctctgttgacaagacttatgtgatc
attggcagctcggtgtccagcatcatcttcatcggcatcgcagtgatcctcatcagctgg
ctgatgctggagttccactaccggagagagtatgacagcttcctcaaagcaacggagact
gtagtctggaaaaatatcgaaaatcctttgttccaggacgccacaaccatagttatgaac
cccatacacattcaagaggactga
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