Salmo salar (Atlantic salmon): 106583216
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Entry
106583216 CDS
T04363
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain containing 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106583216 (ccdc174)
03041 Spliceosome [BR:
sasa03041
]
106583216 (ccdc174)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106583216 (ccdc174)
Spliceosome [BR:
sasa03041
]
Complex C
Other components
EJC/TREX
106583216 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
106583216
NCBI-ProteinID:
XP_014022610
UniProt:
A0A1S3P4X0
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Position
ssa22:28600362..28604465
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AA seq
569 aa
AA seq
DB search
MDKKKKQYAVTASSLVDLKAELYRKQEQFKHEKLGQDAGTSTKAPKIKKPNVWIKQNEGV
SERAQKDVELVAEEENNLDKAKRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKIIDK
KRENHAQRESEREDRESSSPPIPPPENPGEEWVDYVDALGRSRRCMKKDLPGFKKMDKDF
QGKRHDPAEKDLLSEDMRRELQRQEWEREEEEAMNRPVGPIHYENIREQEARELGVGYFA
FSQDQEQRRKQRETLDMLRDQTTDQRSKRDQLKERRKTLLDARLAKVRQRKMKKAKLDGT
EDDQGDEHNQEGKEDLIGPLPPSGGAPEEAPALKKVVVEIQERRDTKPGVPHVREWDRGK
VDFFGEWTSRRRDERESEFAPPSAYFSNNKRQSYGKEAKREKDKPKMAFKWSEGQGGGCK
VPQANPKSTPVPQPSTPVPSQPQPTPSPAQPQNTVHLQNTPAPPAPQCPPQPPPQYPPSQ
QPQPQYTPPPPPQTHPQFDYPFQPQFAHLPFHPQYPTPPHLQYAAPPHFPPQYTPQYPPQ
PQTQPQCPPQTQPPSQSLDDMLSFYKNYS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaagcaatatgccgtgactgcttcatctctggttgatctcaaggct
gaactctacaggaaacaagagcaattcaaacatgaaaaattggggcaagatgctggaact
agtaccaaagcccccaaaatcaagaaacctaatgtttggatcaaacagaatgagggtgtt
tcagagcgggctcagaaagatgtggaactggtggcagaggaagagaacaaccttgacaag
gcaaagcgcaagctagaggagaaggcaaaactgtatgagcagatgaccaaaggagacttc
cctgatgaggagacagagggactttttctggtggatttcacccagaagattattgacaag
aagagagagaatcatgcccaacgagagagtgagagagaggatagagagagctcctccccc
cccatcccaccccctgagaaccctggcgaggaatgggtggactatgtagatgctttggga
cgatctcggagatgcatgaagaaagacctaccagggttcaagaaaatggacaaagacttt
cagggaaaaagacatgacccggctgagaaggacctgctgtcagaggacatgcgtagagag
ctgcaaaggcaggagtgggagagggaggaggaggaggccatgaacagacctgtgggtcca
atccactatgagaacatcagggagcaagaggcccgtgagctgggtgtgggctactttgcg
ttctctcaggaccaggagcagcgcaggaaacagagagagaccctggacatgctcagagat
cagacaacagaccagcgcagtaagagggaccagctgaaggagaggagaaagactctgctg
gatgctcggctggccaaggtgaggcagaggaagatgaagaaggccaagctggacggaact
gaggacgaccagggagatgaacacaaccaagaagggaaggaggacctgattgggccccta
cccccatcaggtggagcacctgaagaggcccctgcattgaagaaggtggtggtggagatc
caggagaggagggacaccaagccaggagtaccccacgtcagagagtgggacaggggcaaa
gtggacttttttggcgagtggacgagtcggcggcgggatgagagggagtcggaattcgcc
cctccctctgcgtacttcagcaataataaaagacagagctatgggaaagaggccaaacgt
gagaaggacaaacccaaaatggccttcaagtggtcagaggggcagggtggagggtgcaag
gtgccccaggccaaccccaaaagtactcctgtaccccagccaagtacccctgtaccctca
caacctcaacccacaccatcccctgctcagccccaaaacactgtccatctccaaaataca
cctgcacctccagcccctcagtgccccccccaacccccacctcagtaccccccctcccaa
cagccccaaccccaatatacaccacctccaccaccacaaacacaccctcagtttgattac
ccatttcagccccaatttgcacatctaccctttcatccccagtatcccactccacctcac
ctccagtatgcagccccacctcacttcccccctcaatacaccccacagtatcccccccag
ccccaaactcagccccagtgcccccctcagacccagcccccctcccagagcctggatgac
atgctgtccttctacaaaaattattcttga
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