Salmo salar (Atlantic salmon): 106583239
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Entry
106583239 CDS
T04363
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106583239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106583239
03036 Chromosome and associated proteins [BR:
sasa03036
]
106583239
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106583239
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106583239
PBAF complex
106583239
GBAF(ncBAF) complex
106583239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
106583239
NCBI-ProteinID:
XP_014022652
UniProt:
A0A1S3P4X2
LinkDB
All DBs
Position
ssa22:28014115..28033056
Genome browser
AA seq
1063 aa
AA seq
DB search
MAVRKKDGGPNVKYFETSDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTRLPMKSFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEAKLLGKLKDIIKRHQQGSVTEDKTCSSHVVV
PIPASLEEEEWVRPVMKRDKQVLLHWGYSPDSYDTWISASEVEAAVEDPPSPEKPRKVHA
KWILDLDQFNEWMNEEDYEVGEGGPKRKRISAKTLTDEVTTPGDERRDKKPGSAKKRKRS
PSPSPTPPSQESKKKNTKKGPTTPNTKSKRGQREEEPEDLTKDLDEPSPVPAVEEVTLPK
TANTKKDSELTPVKGGTMTDLDEQEDESMETAEKEEEEGSPSVKGEPVKGSDLHEDNVTE
QTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQE
YLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPS
SLVPLQPKASQTPAAQQILSFPDKVKEKQPADLQNFGLRTDMYSKKTGPPKSKTAASAMR
DWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDTSSSLGPL
AYQPVPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRV
EEAARASGRQDPLYGLEGSGIAGTSLEEGDKPEESSEESKSDSQSSEEKRETKENKDRAM
EEDEKQGENGKKEEERGREGEGERDREAEKTETEMGEREKEKEGKEALEEGQREGESEGE
RKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLR
HFEELETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQTGG
PHPALAPTGPPPQGPSATQSQPAPSIPAPQPAPSPAPSASSVPMTGPSSAQAQPTEPQPP
PSGPHTSPPRPPCHSSTNTTPTLHESSAPGDTLHSSTPAPTPQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaacgtaaaatatttcgaaacgtctgatacc
gtctcgcaattcgacaatgtccgcgtttggttgggcaagaattataaaaagtacatccag
gcggagccccccaccaacaagtctctgtccagcctggtggtccagctactgcagtttcag
gaggaggtgttcggacgacatgtcagcaacccacctctcaccaggctgccgatgaagagt
ttcctggactttaagtctggcggggctctctgtcacattctggcagcagcctacaagttc
aagagtgatcagggctggcgcaggtttgactttcagaatccttctcggatggaccgcaat
gtggagatgttcatgactattgagaaatccctggtacagaacaactgtctgagtcgacca
gtgatctacctgagctctgacattgaggccaagctgctgggaaaactgaaggacataatc
aagaggcaccagcagggctcagtgactgaagacaagacatgcagctcccatgtggtggtc
cccatccctgccagtctggaggaggaggagtgggtgcgtccggtgatgaagagagacaag
caggtgctgctccactggggatactctcctgacagctatgacacctggatctcagccagt
gaggtggaggcagctgtggaagatccgcccagcccagagaaacccaggaaggtccatgcc
aagtggatcctggacctggaccagtttaatgagtggatgaatgaggaggactatgaggtg
ggagaggggggccccaagaggaagaggatctcagccaagaccctgacggacgaggtgacc
accccgggggacgagcgccgggacaagaagcccggcagcgccaagaagaggaagcgctcc
ccctccccctcgcccactccaccatcccaggagagcaagaagaagaacaccaagaaaggg
cccaccaccccgaacactaagtctaagcgaggccagagagaggaggagccggaggatctg
actaaagatctggatgaaccatcacctgtacctgcagtggaggaggtcaccctacctaag
acagccaacactaagaaagactctgagttgacaccagtgaaaggaggtaccatgacagac
ctggatgagcaagaggatgaatccatggaaactgcagaaaaggaggaggaggagggctct
ccgagtgtgaaaggagagccggtgaaagggtcggaccttcacgaggacaacgtgactgag
cagactcaccacatcatcattcccagctacgctgcatggttcgactacaacagtgtccat
gctattgagcgcagagccctcccagagtttttcaatggcaagaacaaatccaaaacccct
gagatttacctagcctacaggaacttcatgattgacacttacaggctgaacccgcaggag
tacctcacctccactgcctgtcgtaggaacctggccggagacgtgtgtgccatcatgagg
gtgcatgcattcctggagcagtggggtctgatcaactaccaggtggactcagagagccgg
cccacccccatgggccccccgcccacctcccacttccacgtcctggctgacaccccttcc
agcctggtgcccctgcagcccaaggcatcccagactccggcagcccagcagattctgtca
ttcccagacaaggtgaaggagaagcagccagccgacctgcagaactttggcctgaggaca
gacatgtacagcaagaagactgggcctcctaagagtaagactgctgccagcgccatgcga
gactggaccgagcaggagacactactgctgctagagggtctggagatgtacaaggatgac
tggaacaaggtgtcagagcacgtgggctcacgtacccaggacgagtgtatcctgcacttc
ctgcgtctgcccattgaggacccatacctggaggacacgtcctcgtccctgggccccctg
gcctaccagcccgtccccttcagccaggcaggcaaccccgtcatgagcaccgtggccttc
ctggcctccgtggtggacccccgcgtggcctccgcagccgccaagtctgccctggaggag
ttttcccgtatgaaggaggaggtcccagcagcactggtggaggcccatgtgaggagggtg
gaggaggcagcgcgggccagtggcagacaggaccccctctacggcctggagggcagcggc
atcgcaggcaccagcctggaggaaggagacaaacctgaagagagcagtgaggagagtaag
agtgacagccaatccagtgaggagaagagggagaccaaggagaataaagatagagccatg
gaagaggatgagaagcaaggagaaaatgggaagaaggaggaggagagagggagagaggga
gaaggagagagagaccgagaggctgagaagacagagacagagatgggtgagagagagaag
gagaaggaagggaaggaggccttggaggagggccagagagaaggagagagcgagggcgaa
aggaaggcgaaggtggagcgggatgtgggagaggggaacctggctaccgctgctgcctcc
gccctggctgctgctgccgtcaaagccaagcacctggctgcggtggaggagaggaagatc
aagtctctggtggctctgctggtggagactcagatgaagaagctggagatcaaactgaga
cactttgaagagctggagactatcatggaccgagagagggaggctttggagtaccagagg
cagcagctgctggcagaccgtcagtcgttccacatggagcagttgaagtatgcagagatg
agggcgcgtcagcagcacttccaacagatccagcaccagcagcatagccagactggaggc
ccacaccccgccctggcccccacgggccccccaccccagggcccctcagccacccagtcc
cagccggcccccagtatccctgcaccacagccagctcccagcccagcaccctctgcctcc
tccgtccccatgactggcccctcctctgcccaggcccagcccactgagccccagccgcca
cccagtggtcctcacacctcacctccccgcccgccatgccactccagcaccaacaccacc
ccaacactccacgagtccagcgcccctggggatacactccactcctcaacccctgctccc
actccacagtga
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integrated database retrieval system
