Salmo salar (Atlantic salmon): 106583357
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Entry
106583357 CDS
T04363
Name
(RefSeq) syntaxin-18-like
KO
K08492
syntaxin 18
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04130
SNARE interactions in vesicular transport
sasa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106583357
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106583357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106583357
Membrane trafficking [BR:
sasa04131
]
SNARE
Syntaxin (Qa)
Stx-rER
106583357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
ACR_tran
DUF4559
ICAT
DUF7165
DUF6331
Motif
Other DBs
NCBI-GeneID:
106583357
NCBI-ProteinID:
XP_014022965
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All DBs
Position
ssa22:complement(44406756..44417508)
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AA seq
289 aa
AA seq
DB search
MDRERHMDKISNITKLKDFLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTC
SEAIKQLRSEAEKQVISTQIKEHRGAVLDLIEMYLKGVCKLYSEQRAIRVKRVVDKKRLS
RLEPEHHHSRVVVEKSPQVEHHSEEKTSKEESSSGERSVMEVPENNVSLWEEGQGRVDDE
LSPEEMQMFEQENQRLVSEMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETEIDSIHQ
LVVGATENVKEGNEDIREAIQNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatagagagagacacatggacaagatctccaacatcaccaagctgaaagactttcta
ctgcagcacaggaaggactatgtgaatgctggaagtctcatctcatcagacctaacccgg
atgacagacaatgagcgagaccagatcgaccaggatgcccagatcttcatgagaacctgc
tctgaagccatcaagcagctccgctctgaagctgagaaacaggtcatatcgacccagatt
aaagagcacaggggggctgtcctcgacctaatcgagatgtatttgaaaggagtatgcaag
ctttattccgagcagagggctatacgagtgaagagagtggtagacaagaagagactgtcc
cgactagagccagagcaccaccacagtagggtggtggtggagaaaagcccacaggtggaa
catcacagcgaggagaaaacatccaaggaggagagcagcagcggtgagcgaagcgtgatg
gaggtcccggagaacaatgtgagcctgtgggaagagggccagggtcgtgtggatgacgag
ctctcacctgaggagatgcagatgtttgaacaggagaaccagaggctggtgagtgagatg
agcaacctagtagatgaagtcaggcaaatcgaaggcaaggttgtcgagatctcgcgactc
caggagatttttgcggagaaggtgctaatgcaagaaactgagatagacagtatccatcag
ctagttgtgggagccactgaaaacgtcaaagagggaaacgaggacatccgagaggccatc
caaaacaatgctggattccgtgtctggattctcttcttcctcgtcatgtgctccttctct
ctgctcttcctggattggtacgacagctaa
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