Salmo salar (Atlantic salmon): 106583380
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Entry
106583380 CDS
T04363
Symbol
rho
Name
(RefSeq) rhodopsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sasa04030
]
106583380 (rho)
G protein-coupled receptors [BR:
sasa04030
]
Rhodopsin family
Vision
Opsin
106583380 (rho)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srv
TAS2R
Motif
Other DBs
NCBI-GeneID:
106583380
NCBI-ProteinID:
XP_014022982
UniProt:
A0A1S3P5W3
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Position
ssa22:41929726..41938297
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AA seq
343 aa
AA seq
DB search
MMQLLASLPNATSYLGTSPEGEELLPRAGFITLSIVMAMFTVPAIVLNSTVIVVSLMNKQ
LRQPLNYALVNMAVADLGTALTGGVLSVVNNALGYFSLGRTGCIIEGFSVALFGITSLCT
VALIAIERMFVVSKPLGPISFQTKHAVVGVTLSWVWSLIWNTPPLFGWGRYELEGVGTSC
APDWHNRDPSNVSYILCYFLLCFAVPFLIIVASYSKLIYTLRQVSAMGCIEGGAAAKAEA
KVARMVVLMVVTFLISWLPYATLALVVVSHPDAHISPLLGTVPVYLAKSSTVYNPLIYLY
MNKQFRRYAVPFLLCGRDPWPSEEEGSEMQTTVATINNKVSPS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagctgctagcctctctccccaacgctacgtcctacctgggaacgtcccccgag
ggcgaggagctcctgccccgagccggcttcatcaccctctccatcgtcatggcgatgttc
accgtaccggccatcgtgttgaactccacggtgatcgtggtgtcactgatgaacaagcag
ctgaggcaacctctgaactacgccctggtcaacatggccgtagctgacctggggacagcg
ctgactggtggggttctgtctgtggtcaacaacgctctggggtacttctccctgggacgg
accggctgtatcatagagggattctctgtggctctgtttggtatcacgtcactgtgcacg
gtagctctgattgccatagagaggatgtttgtggtgagcaagccgctaggaccaatctcg
ttccagaccaagcatgcggttgtgggtgtgaccttgtcttgggtttggtctctcatctgg
aacaccccgcccctattcggctggggaaggtacgagctggagggcgtggggacgtcgtgc
gccccggactggcacaaccgggaccccagtaatgtgtcatatatcctgtgctacttcctg
ctgtgtttcgccgtacccttcctcatcatcgtggcctcttactctaaactcatttacact
ttaagacaggtctctgcaatgggctgtatagaagggggtgcagcagccaaggcggaagct
aaggtggcccgcatggtggttctgatggtggttactttcctgatcagctggctgccctac
gctaccctggcccttgtggtggtctcccaccctgatgcccacattagccctctgctgggc
accgtgccagtctacctggccaagagcagcaccgtgtacaaccctctcatctacctctac
atgaacaaacagttccggagatatgcagtgcccttcctgctgtgtgggagggacccatgg
ccatctgaggaggaggggtcagagatgcagaccactgtggcaaccatcaacaacaaagtc
tcccccagttga
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