Salmo salar (Atlantic salmon): 106583704
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Entry
106583704 CDS
T04363
Symbol
smarcd1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106583704 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106583704 (smarcd1)
03036 Chromosome and associated proteins [BR:
sasa03036
]
106583704 (smarcd1)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106583704 (smarcd1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106583704 (smarcd1)
PBAF complex
106583704 (smarcd1)
GBAF(ncBAF) complex
106583704 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
106583704
NCBI-ProteinID:
XP_014023683
UniProt:
A0A1S3P7V3
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All DBs
Position
ssa22:complement(52452705..52481082)
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AA seq
514 aa
AA seq
DB search
MAARGSFQSAPTGGGGGGMGPGPQVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGPG
YPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQVQQVQQQRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEF
YFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcggctccaacgggaggtggtggcgggggaatggga
cccggaccccaggtgcaaggtggaggaccaggcatgggacctggaactcctggaggaagg
atgggaccctcatcgggcgcacagaaccacctttaccgatctccgatgcctgggcctgga
tacccgagaccaggtgggatgcccccctccagccgtatgacaccccagggtccgcccatg
gggcctccaggctacggctccagccccgtgtcccgaccagggatgcctggcgtcatggat
ccctcccgtaagaggcctgccccccagcaggtccaacaggtccagcaacagcgcaaccaa
catacaaagaagaagaaaatggcggataagattttacctcagaggatccgggagctggtg
ccagagtctcaggcctacatggacctgctggcgtttgagaggaagctggatcagaccatc
atgaggaaacgtctggacatccaggaggcactcaagagacccatcaagcaaaagcgaaag
cttcgtatcttcatatccaacaccttcaaccctgccaagcccgacgcagaagacggagag
ggcactgttgcatcatgggagctgcgtgttgaagggcgcctgcttgaagatactgctgtg
tccaaatatgaagccaccaagcagaagagaaagttctcttccttcttcaagtctctggtc
atcgagttggacaaggacctctatgggcctgacaatcacttggtcgagtggcacaggact
gcgaccactcaggagacagacgggttccaggtgaagaggccaggggatgtgggcgtacgc
tgcactgtcctgctcatgctggactaccagccccctcagttcaaactggaccctcgtctg
gcccgtatgttggggatccacacccagaccaggccggtcatcatccaggccctctggcag
tatgttaagacccacaagctgcaggacccccacgagagagagttcatcaactgtgacaag
tacctgcagcagatctttgagacccagcgtatgaaattctctgagatcccacaacgtcta
catgctctcctgatgcctccagaacccatcatcattaaccatgtcatcagtgtggatccc
aatgaccagaagaagacagcctgctatgacatcgatgtggaggtggacgacactctaaag
acccagatgaactccttcctcctatccactgccagccagcaggagatcgctggcctggac
aacaagatccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatg
ttgagcttcgccagagacccccagggcttcatcaacgactggctgcagtcacagtgcagg
gatctcaagactatgactgatgtggttgcgaacccagaagaggagaggagagcagagttc
tatttccaaccctgggcccaggaggccgtgtgtcgttacttctactccaaggttcagcag
aggaggcaggagctggaacaagccctgggaatcagaaacacttag
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