Salmo salar (Atlantic salmon): 106583797
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Entry
106583797 CDS
T04363
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein A
KO
K16482
centriolar protein POC1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106583797 (poc1a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106583797 (poc1a)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
106583797 (poc1a)
Cilium and associated proteins [BR:
sasa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106583797 (poc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
RMC1_N
PROPPIN
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_IP5PC_F
Nucleoporin_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
106583797
NCBI-ProteinID:
XP_014023848
LinkDB
All DBs
Position
ssa22:complement(59808411..59890914)
Genome browser
AA seq
481 aa
AA seq
DB search
MTSALDDPTLERHFKGHRDTITSVDFNCNMKQIATGSMDSCLMIWNLKPQMRAYRFVGHK
DAVTSVQFSPSGHLVASASRDKTVRLWVPSVKGESTVFRAHTGTVRSVSFSGDGQTLVTA
SDDKTLKVWTVHRQKFLFSLNQHMNWVRCAKFSPDGRLIVSASDDKSIKIWDKNSQECIH
SFYEHGGYVNYTDFHPSGTCIAAASTDNTVKVWDIRTNKLLQHYQVHSGVVNGLSFHPSG
NYLITASNDSTMKILDLLEGRLLYTLHGHQGPVACVMFSRTGDYFASGGSDEQVMVWKTN
FKTADYGEVLRLQQTATCVDLGGAGVGGGGAAAGGGGGAAFAGDSRNSLLHRQESSESEL
CNGQERGLRTEVRSRSGSFTRSLSSRPTQTSRAPRARPSSVQQTRTQPETQTHAQREGMV
PAGLASTLEHIVAQLDVLTQTVAILEQRLTLTEDKLKECIDNQHQINLQLHRREPDLQPS
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgcattggatgatccaaccctggagaggcacttcaagggccacagagacacc
ataacaagcgttgacttcaactgtaacatgaaacaaattgcgaccggctccatggattcc
tgtctcatgatctggaacttgaagccccaaatgagagcctatcggtttgtgggacataaa
gacgctgtgacgtcagtccagttctctccctccggacatctggtggcctcagcttccagg
gacaagactgtccgcctctgggtgcccagtgttaagggcgagtccacagtgttccgagcc
cacaccggaacggtccgcagtgtcagtttctccggtgacggacagaccttggtcaccgcc
tccgacgacaaaactctcaaagtttggaccgttcacagacagaagttccttttctctctc
aaccaacacatgaactgggtccgctgtgccaagttttcaccagacggcaggttgatcgtg
tcggccagtgacgacaagagcattaagatctgggacaagaacagtcaggagtgtatccac
tcattctatgaacatggagggtatgtaaactacactgacttccaccccagtggaacgtgc
attgctgcagcaagcacagacaacactgtcaaggtctgggacatcaggaccaacaaatta
ctgcagcattaccaagttcacagcggagtggtgaacggtctatccttccatccatctggt
aactacctgattacagcctctaatgactccactatgaagatactggacctgctggaggga
cggctgctctacacactgcacggacaccagggcccagtcgcatgtgtaatgttttccagg
accggagactactttgcctcaggaggatctgatgaacaggttatggtgtggaagactaat
tttaaaacagctgactatggagaagttctacgactgcagcagacagcgacctgcgtcgac
cttggaggagcaggagtaggaggaggaggagcagctgcaggaggaggaggaggagcagct
tttgccggagactccaggaactccttgctccataggcaggagtcctctgagtcggagctg
tgtaacggccaggagcggggcttacgtacagaggtgaggagtaggagtggcagcttcacc
cggagcctgtcttccagacccacccagacatccagggcccccagggccaggccctcctct
gtccagcagacacgtacccagcccgagacacagactcatgcccagagagaaggcatggtg
cctgctggtctggctagcactctggaacacatagtggctcaactagatgttctcacacag
actgtggccatcctagaacagaggctgactctgacagaggacaagctgaaggagtgtatt
gacaaccagcatcagatcaacctgcaactccaccgcagggaaccagacctccaaccaagt
gactaa
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integrated database retrieval system