KEGG   Salmo salar (Atlantic salmon): 106583797
Entry
106583797         CDS       T04363                                 
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein A
  KO
K16482  centriolar protein POC1
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sasa03036]
    106583797 (poc1a)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sasa03037]
    106583797 (poc1a)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    106583797 (poc1a)
Cilium and associated proteins [BR:sasa03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   106583797 (poc1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NWD2_C eIF2A Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_WDR75_2nd RMC1_N PROPPIN Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F Nucleoporin_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 106583797
NCBI-ProteinID: XP_014023848
LinkDB
Position
ssa22:complement(59808411..59890914)
AA seq 481 aa
MTSALDDPTLERHFKGHRDTITSVDFNCNMKQIATGSMDSCLMIWNLKPQMRAYRFVGHK
DAVTSVQFSPSGHLVASASRDKTVRLWVPSVKGESTVFRAHTGTVRSVSFSGDGQTLVTA
SDDKTLKVWTVHRQKFLFSLNQHMNWVRCAKFSPDGRLIVSASDDKSIKIWDKNSQECIH
SFYEHGGYVNYTDFHPSGTCIAAASTDNTVKVWDIRTNKLLQHYQVHSGVVNGLSFHPSG
NYLITASNDSTMKILDLLEGRLLYTLHGHQGPVACVMFSRTGDYFASGGSDEQVMVWKTN
FKTADYGEVLRLQQTATCVDLGGAGVGGGGAAAGGGGGAAFAGDSRNSLLHRQESSESEL
CNGQERGLRTEVRSRSGSFTRSLSSRPTQTSRAPRARPSSVQQTRTQPETQTHAQREGMV
PAGLASTLEHIVAQLDVLTQTVAILEQRLTLTEDKLKECIDNQHQINLQLHRREPDLQPS
D
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgacttccgcattggatgatccaaccctggagaggcacttcaagggccacagagacacc
ataacaagcgttgacttcaactgtaacatgaaacaaattgcgaccggctccatggattcc
tgtctcatgatctggaacttgaagccccaaatgagagcctatcggtttgtgggacataaa
gacgctgtgacgtcagtccagttctctccctccggacatctggtggcctcagcttccagg
gacaagactgtccgcctctgggtgcccagtgttaagggcgagtccacagtgttccgagcc
cacaccggaacggtccgcagtgtcagtttctccggtgacggacagaccttggtcaccgcc
tccgacgacaaaactctcaaagtttggaccgttcacagacagaagttccttttctctctc
aaccaacacatgaactgggtccgctgtgccaagttttcaccagacggcaggttgatcgtg
tcggccagtgacgacaagagcattaagatctgggacaagaacagtcaggagtgtatccac
tcattctatgaacatggagggtatgtaaactacactgacttccaccccagtggaacgtgc
attgctgcagcaagcacagacaacactgtcaaggtctgggacatcaggaccaacaaatta
ctgcagcattaccaagttcacagcggagtggtgaacggtctatccttccatccatctggt
aactacctgattacagcctctaatgactccactatgaagatactggacctgctggaggga
cggctgctctacacactgcacggacaccagggcccagtcgcatgtgtaatgttttccagg
accggagactactttgcctcaggaggatctgatgaacaggttatggtgtggaagactaat
tttaaaacagctgactatggagaagttctacgactgcagcagacagcgacctgcgtcgac
cttggaggagcaggagtaggaggaggaggagcagctgcaggaggaggaggaggagcagct
tttgccggagactccaggaactccttgctccataggcaggagtcctctgagtcggagctg
tgtaacggccaggagcggggcttacgtacagaggtgaggagtaggagtggcagcttcacc
cggagcctgtcttccagacccacccagacatccagggcccccagggccaggccctcctct
gtccagcagacacgtacccagcccgagacacagactcatgcccagagagaaggcatggtg
cctgctggtctggctagcactctggaacacatagtggctcaactagatgttctcacacag
actgtggccatcctagaacagaggctgactctgacagaggacaagctgaaggagtgtatt
gacaaccagcatcagatcaacctgcaactccaccgcagggaaccagacctccaaccaagt
gactaa

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