Salmo salar (Atlantic salmon): 106584195
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Entry
106584195 CDS
T04363
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106584195
Membrane trafficking [BR:
sasa04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
106584195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
106584195
NCBI-ProteinID:
XP_014024664
UniProt:
A0A1S3PAT4
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Position
ssa23:13675246..13783003
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AA seq
1538 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPNN
QVQVVKNLRISVNNVVTRPSVPASGVPGHAHRRLLSEVVLTCQPAEGGVANVITAGDYDL
NISDRSLKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEAVPVEKFLKLSQEQHRIQHSGEYTNPKWFIPNTLKYYVLLHDMSQGDEQR
ADSVYEDMKQRYGAQGCYLLKVNSRTAAAGADEQIPDPWSQYLHKNSLQSQDQYEDPAPV
VVNNTALQNNVGGTSEVDGHDSEEKDGITNSLATRLHIVDNDIVCRLSDGVLVNSLDNTH
PLQLDTPSDTPGSLDALRAVAVETKPPPIATGVAAATSHGACLTLNDHDRIRLFIQEFTF
RGLLPHIEKNIRQLNDQLVSRKGLSRSLFSATKKWFGGGKVPEKSIAELKNTSGLLYPPE
APELQIRKMADLCFLVQLYDLAYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQVGAP
RPYPAHYMDTAIQTYRDVSKNMILAERCALLSAEVLKSQAKYSDAATLLIKMTSEDSDLR
SALLLEQAAHCFINMRNPMVRKFAFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWS
LAEDHINFTIGRQSFTLRQPENAVTAFRHILTNDSQQTSTQQGAFLREYLYVYKNVTGAC
EVALPQLPLPCINSSATRVYFGHERRLAEGEKQAATHVSLDQEFDRDLAAMWQDLEEQVV
AAAKRGVVPATFQPTQCCLNSQTDNLRFPLAVVEEPIIVEVVFRNPLKVPLVLSDLSLLW
KFTFKDFNRPQPQEDSVGDAVAISNEKEASVPRTPQKDDVIATEVIPEFYLSPEETKLAR
LKLLPHQTGQLNILGLVYNLASTSSTGDTTINSTAASQSEGPSAAEGTSVRGRQDLEIQG
PRLNQTKEEKTSVSHGPDRRLDPTITPPMPLLEVFFLQFPTALLCGEIRKAYVEFCNVSR
VTLCGLRVASTHPDFFTFGSSSLATPLTPLSPTSFENCSAYKTLATPPGATPGSVAAVTL
VSEGDFGSGIGLRGGGVAGTGGKGITEIPLGEGTLKPGESTQLPLWLRGPDQEGVHEIHF
LFYYESAEQGGKISHRVLRHTVFICASRSLSVRATACRSNTLPEEEEEERNGSMLVFVDV
ENINSSEAGVREFHIAQVSSSSKQWRLHKCINPAEDKDCKLTSRERGKLCFRATRCKPLQ
VPLKAVEKYTFADLSLGNELIITSTTPCADFFFRRCQPLESLRPPVAMETQGRHSRSQGV
GHGGGAKDIAGVVRKCNEVDLDIIILWKAFVVEDNKQVILEGQLHVALQTIDKEACSLTQ
KEEAQEMVLLKFKPELPPPMTRPSMEQLSHLIKTNLQYPESYSHPFNQKSLCMVPVTLTL
SNCSLAQVDVIIDLRHKTTSPESLEVHGSFTWLGQTQFKLQLGAQEVMRVQLQACFLHAG
VYNLGTPRVFAKLADQGAMCETSQQTATPALIIIINST
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtcggtgcaggaattcatccaggactcgtttgtcccgatggtg
gcggtcctgtgcagcgaagatgcggagaaagtgactcgtaaaaacaacctgaatttctcg
gagctgctaaggcccttctgccggttaacatccgaaggtcacatgagggaccccaacaac
caggtgcaggtggtgaagaaccttcgcatcagcgtcaacaatgtggtgacacgcccttct
gtccctgcctccggcgtccctggccatgcccaccgacggctgctcagcgaggtggtgttg
acatgccaaccggctgagggtggtgttgccaatgtcattactgctggcgactatgacctc
aatattagtgatcgctctcttaaagctagcgtcccctggtacagtgactggagggacaca
ctaacggaactcagcacctccaagcactacacagccacgactccctggtttgaggcatac
agagagagcttcctccagtccatgcctgcctctgaccatgagttcctcaaccactacctc
gcctgtctgttggtggtgtcgtccagtgaggctgtaccagtggagaagttcctcaagctg
tctcaggagcagcacaggatccagcacagcggcgagtacaccaaccccaagtggttcatc
cccaacacactcaagtactacgtcctgctgcacgacatgagccagggagatgaacagcgg
gctgactctgtgtatgaggatatgaagcagaggtatggtgctcagggttgttacctgttg
aaggtcaactctcgtactgcggcagcgggagcagacgaacagatcccagacccatggagc
cagtaccttcacaagaacagcctgcaaagccaggatcagtatgaggatccagcccctgta
gtggtgaacaacactgcattacagaacaacgtaggaggaacatctgaggtggacggacac
gactcggaagagaaagacggaatcaccaacagtctggccacacgccttcacattgttgac
aatgacattgtgtgtcgtttatcagacggagtcttggtcaacagtctggacaacacccat
cccctccagctggatacacccagtgacacgcccggtagcctcgacgctctcagggccgtc
gccgtggaaaccaagccaccgcccatcgccacgggagtggcagcggccaccagccatggg
gcgtgcctaacgctgaacgaccacgaccgcatcagactgttcatccaggagtttaccttc
aggggactactgcctcacatagagaagaacatcagacagctcaatgaccagctggtctcc
aggaaaggcttgagtcgctctcttttctctgccactaagaagtggtttggaggagggaaa
gttccagagaagagtatcgctgaactgaagaacacttctggcctcctgtatcccccagaa
gcccctgagctgcagatcaggaagatggctgacctttgtttcctggttcagctctatgac
ctggcgtacagctgctaccacacggccaagaaggatttcctctctgaccaggccatgctc
tatgccgctggggcactggagatggcagcagtgtctgcgtttctacaagttggggctcca
aggccgtatccagcacactacatggacacggcaatacagacctacagagatgtgtccaag
aacatgatcctagctgaacgttgtgctctgctcagtgctgaggtactaaagagtcaggcc
aagtactctgacgctgctaccctcctcatcaagatgaccagtgaggactctgacctgcgt
tctgccctcctattggagcaggcagcccactgtttcattaacatgcggaaccccatggtc
aggaagtttgccttccacatgatcctggcaggacaccgcttcagcaaggcagggcagaag
cgccatgcgttgcggtgttactgccaggccatgcaggtgtataagggtaaaggctggtcc
ctggctgaggaccatatcaacttcactattggccgccagtccttcaccctgcgccaacca
gagaacgctgtcacagccttcagacacatcctcaccaatgacagccagcagacctccaca
cagcagggagccttcctccgggaatacctctacgtctacaagaatgttacgggggcatgt
gaggtggcgctaccccagcttcccctaccctgcatcaacagctctgccaccagggtctac
ttcggccatgaacgccgcctggcagagggtgagaagcaggcagccacccacgtgtccttg
gaccaggagtttgaccgggacctagctgccatgtggcaggacctcgaggaacaggtggtt
gccgccgcaaaacgtggggtcgttccagcaacgtttcaacccacccagtgctgcctgaac
agtcagacggacaacctccgcttcccacttgctgttgtggaggaacccatcatagttgag
gtggtgttccggaaccctctgaaggttccactggttctctctgacctctcgctgctctgg
aagttcacattcaaagacttcaatcgaccgcaaccgcaggaagactcggtcggagatgct
gtggccatcagcaacgagaaggaggccagcgttcccaggaccccacagaaagatgacgtc
attgccacagaagtcatcccagagttctacctgagccctgaggagacgaaattggctcgt
ctgaagctgctgccccaccagacaggtcagctcaacatcctgggtctagtctataacctg
gcctctacctcctctactggagacactactatcaacagcaccgcagcctcacagagcgaa
ggtccctcagcggcagaggggacatcagttcgtggtcgacaggacctagagatccaggga
ccgcggttgaaccagaccaaagaggagaagacctcagttagccacggtcctgaccgacgt
cttgaccccaccatcactcctcccatgcccctgctagaggtattcttcctccagttccct
actgccctgctatgtggtgagatcaggaaggcttacgtggagttctgtaacgtgagtcgc
gttaccctgtgtggtctgcgggtggcgtccacgcacccagacttctttacctttggaagc
tcctccttagccacacctctcacccccctcagccccacctcttttgaaaactgctccgcc
tacaagaccctggccacaccccctggcgccacacccgggtccgttgccgcggtgacactg
gtttcagagggggactttgggtcagggatagggttgaggggaggaggagtggccggcacg
gggggtaaagggataacggagatccctctaggagaggggacactaaagcctggagaatct
acccagctgcccctgtggctgagaggaccagaccaggaaggagtccacgagatccacttc
ctgttctactacgagagcgctgagcagggaggcaagatcagtcacagggtgttgcgtcac
acagtatttatttgtgccagtcgttcgctgtctgttcgggccacagcttgccgtagtaac
acactgcctgaggaggaggaggaggagaggaacggcagcatgctggtctttgttgacgtg
gagaacatcaactcgagcgaggctggggtgcgtgagtttcacattgcacaagtctctagc
agcagtaaacagtggagactacacaagtgtataaacccagcagaagacaaagactgcaaa
ctcaccagcagagagagaggaaagctgtgcttcagagcaacacgatgcaaacccctgcaa
gttcctttgaaggcagtagagaaatacacatttgcagacctgagccttgggaatgaactg
atcatcacctccaccactccatgtgcagatttcttcttccggaggtgtcagcccttggag
tctctgagacctcccgttgccatggagacacaggggagacattccaggagtcagggggtg
gggcatgggggtggggccaaggatatagcgggcgtggtcaggaagtgcaacgaggtggac
ctcgacatcatcatcctctggaaggcatttgttgtagaggacaacaagcaggtgatccta
gagggacagcttcatgtggccctacagaccatcgacaaagaggcctgctctttgacacag
aaagaggaggctcaggagatggtgctgctgaagtttaaaccggagctgccgcctccaatg
acacggccctccatggaacaactctcccacctcatcaagaccaacctgcagtacccagag
agctacagccaccccttcaatcagaagagtctgtgtatggttccagtcactttgactctg
tctaactgctccctggctcaagttgatgtcatcattgacctacgccacaaaacaaccagc
cctgagtctctcgaggtgcatggttcgtttacatggctgggccagacgcaattcaagctg
cagttgggggcacaagaagtgatgcgagtgcagctgcaagcctgcttcctgcatgcgggc
gtctataatctgggaacgccacgggtctttgccaaactggcggaccagggagccatgtgt
gagaccagccagcagacggccacgccagcactcatcatcatcatcaacagcacctga
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integrated database retrieval system
