Salmo salar (Atlantic salmon): 106584312
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Entry
106584312 CDS
T04363
Name
(RefSeq) paired amphipathic helix protein Sin3b-like
KO
K23213
paired amphipathic helix protein Sin3b
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106584312
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106584312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
MCP_V20_C
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
106584312
NCBI-ProteinID:
XP_014024894
UniProt:
A0A1S3PBK0
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Position
ssa23:25762585..25772586
Genome browser
AA seq
1222 aa
AA seq
DB search
MSVTISGIMAKIQAHSNTKQINQIQDKAYVVQKQVQQQHFQKLKVEDALSYLDQVKIRFG
NDPGIYNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNG
IVFLQSPFSAQVSPGQGKSMASPAVSATGSSVAEVGSAQSEAVASPESIYSSSGPPEPPS
RLSLPLPSRESPSQPQSSSVSPPASEPSPVEFDSAISYVNKIKNRFLDHPEIYRSFLEIL
HTYQVHCVINMKEQLEVKESRGHGSSGMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKR
SLFTGSPLTGKDHLKRAEDEDMSKQSKKRPRPMLLPHMTPLLKKKMKFSCSKDQSFASVG
KHGVLREFTFFDKLRRFFKSREVYENFLRCIALFNQEVVSGAELLQLVTPFLGKFPELYT
QFKSFLGDKELSHSVSGLSDRYMEGGGGREVDYASCKRLGSSYRALPKTYQQPKCSGRTA
ICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETNLATIRVLES
VQKKLSRLSPEDQDRFRLDDCLGGTSEVIQRRAIYRIYGDKAPEIIEGLKRSPATAVPVV
LKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIES
VYDERQEQSTEEGGVVQQGRDGSSAPAVSDPHMVFTYEDKQILEDAASLIIYHVKRQPTI
HKDDKDHIKRIIQHFVPDLFFSRRGELSETEEWTDEEVEERGDRGGGCGGIPGAVATSGS
QQQPQHQQLNGESRRRRCTSPQTVELGVASSHSLAPEGGEKVDLRDPEAEHQKELDGVYN
LFFVNNNWYFFLRLHQTLCQRLLRVYRQAERQLLEHRAEQNRERLLMAEGRDLAMELRLK
QPSEVELEEYYPAFLDMVRSLLDGNLESTQYEDTLREMFTIHAYIGFTIDKLIQNLIRQL
QHLVSDEVCLQVAELYLAERKRGAAGANLSSQCVRTAWETSYQWKSERVMAEENCFKVMF
IQNQGQVTLTIELLDTEEAQADDPLDVQCLSSYMEQFVGTGSTLCSQNEGYFFKPVFLPR
NLRHFRRWQVRQVEAMRCRREWHRQLGVESAGSLDCRFKLNTHKMVFVMNSEDYMYRRGA
LVKARKSQHRVAVNQHERFDKWHQGWLVEHVTPAAERSVHDWLIGEEEEDMIPCKTTCLN
TQVKGLPVNRYQVHYSRKPPSP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttactatctccgggatcatggcgaaaattcaggcacacagcaacacgaagcaa
ataaaccaaattcaagacaaggcctatgttgtacaaaagcaagtgcaacaacagcacttt
caaaaactgaaggttgaagatgcactatcatacctggaccaagtgaaaatacgatttggg
aatgaccctggaatatacaacaaatttcttgacataatgaaagaattcaaatcacaaagc
attgacacaccgggtgttataaatcgtgtgtctcagctcttccacgggcacccggacctc
gtcttaggattcaatgccttcctgcccccagggtatcggatagagattcccaagaatggc
atagttttccttcagtccccattctctgcccaggtgtccccaggtcaggggaagagtatg
gcaagccctgctgtgagtgccacaggctcatctgttgctgaagttggatctgcccaaagt
gaagctgtggcatcacctgaaagcatctactcatcctcagggcccccagagcctcccagt
agactgtccttgccactccccagcagagagagcccatcccaaccacagtcctcctcagtg
tccccccctgcctcagagcccagcccagtagaatttgacagtgctatcagctatgtcaac
aaaatcaaaaaccgcttcctagaccatccagagatctacagatccttccttgagatacta
cacacttaccaggtacactgtgtcatcaatatgaaggagcagcttgaggtcaaggagagc
cggggtcatggtagtagtggaatgacagaggatgaagttttctcaaaagtggccagcctc
ttcaaaggccaagaggacttactggctgagtttggacagttcttaccagatgctaagaga
tcactgttcactggcagccccctgactgggaaagaccatctgaagagggcagaggacgag
gacatgagcaaacagagcaagaagagacccaggcccatgctgctgcctcacatgacacca
ctgctcaagaaaaagatgaagttttcatgctccaaagaccagtcctttgcctcagttggg
aagcatggagtcttgcgggagttcacattttttgacaagcttcgccgtttcttcaagagt
cgggaggtatacgagaacttcctccgctgtattgctttgtttaaccaggaagtggtttcg
ggagcagagctgctgcagcttgtcactccctttctagggaagtttccagagctatatacc
cagttcaagtcttttctgggggacaaagagctctctcattcagtgtctggcctgtcagac
cgatacatggaaggaggtgggggcagggaggttgactatgcctcttgcaagcgcctggga
tccagctacagagcactacccaagacttaccagcagcccaagtgcagcggtcgcactgct
atctgcaaagaggtgctgaatgacacctgggtttctttcccttcgtggtcggaggactct
acgtttgtgagctcaaagaaaaccccatacgaggagcagcttcatcgctgtgaggacgaa
aggtttgagttggatgtggtcctggagactaacctggccaccatccgggtcctggagagc
gttcagaagaagctgtcccgtctgtcgcctgaggaccaggaccgcttccgtctggacgat
tgtctgggaggcacatctgaggtcatccagcgccgagccatctaccgtatctacggcgac
aaggcccctgagattatagaggggctgaagaggagccctgctactgccgtgcctgtggtg
ctcaagagattgaaagcgaaggaggaggagtggagagaagcccagcagggcttcaacaag
atctggagggagcagtatgagaaggcctacctcaagtccctggaccaccagggggtcaac
ttcaagcagaatgacatgaaggccctccgatccaagagcctgctcaatgagattgaaagt
gtttatgatgagcgtcaggagcagagcacagaggaggggggcgtggtccagcaggggcgt
gacgggagcagcgcgccagcggtcagcgatccccacatggtgttcacctacgaggacaag
cagatcctggaggacgccgcctctctcatcatctaccacgtcaaacgccagcccaccatc
cacaaggacgacaaggaccacatcaagcgcatcatacagcactttgtccccgacctcttc
ttctcccgccgcggcgagcttagcgagacggaggagtggacggacgaggaggtggaggag
agaggagaccggggaggaggatgtggcggtataccaggagccgtagcaacatcaggcagt
cagcaacaacctcagcatcagcagctgaacggggagtcgaggcggcggcgctgcacctct
cctcagacagtggagcttggtgtagcctcgtcccatagcctggctccagagggaggggag
aaggtggacctgagagaccctgaggcagagcaccagaaggagctagacggagtctacaac
ctgttcttcgtcaacaacaactggtacttcttcctgcggctgcaccagaccctgtgccag
cggctgctgagggtgtaccggcaggcggagaggcaactgctggagcaccgtgcagagcag
aaccgcgagaggcttctgatggccgagggccgcgacctggccatggagctccgcctcaaa
cagcccagtgaggtagaactggaggagtactacccagcgttcctggatatggtgcgcagt
cttctggatgggaacctggagtccacacagtacgaggacacattgcgggagatgttcacc
atccacgcctacattggcttcaccatcgacaagctcatccagaacctcattagacagctg
cagcacctggtgagtgacgaggtgtgtctgcaggtggctgagctgtacctggccgagagg
aagaggggcgcggcgggggctaacctgtcgtcccagtgtgtgagaacggcctgggagacc
agctaccagtggaagtcggagagggtcatggctgaggagaactgctttaaggtaatgttc
attcagaaccaaggccaggtgaccttgaccattgagctgctggacacagaggaggcccag
gctgatgatccattggatgtacagtgcctgtccagctatatggaacagtttgtagggaca
gggtcaacgctttgctcgcagaacgaaggctactttttcaaaccggtatttttgcccagg
aacctgaggcacttcagacgctggcaggtgcggcaggtggaggcgatgcgctgcagacgg
gagtggcacaggcagctgggagtggagagtgctggcagtctggactgccgctttaaactc
aacacccacaagatggtgttcgtcatgaactctgaggactacatgtaccgccggggagcg
ctggttaaagccaggaagtcccagcacagggttgctgtgaaccagcacgagcgctttgac
aagtggcaccagggctggctggtggagcacgtgaccccggcggccgagcgctccgtccac
gactggctgataggcgaggaggaggaggacatgattccgtgcaagaccacctgcctcaac
acacaggtcaaagggctgcctgtcaacagataccaggtgcattacagtaggaaacccccc
tctccgtag
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integrated database retrieval system
