Salmo salar (Atlantic salmon): 106584342
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Entry
106584342 CDS
T04363
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106584342
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106584342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106584342
NCBI-ProteinID:
XP_014025020
UniProt:
A0A1S3PBK7
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Position
ssa23:complement(27982140..27985000)
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AA seq
315 aa
AA seq
DB search
MYNMMETELKPTAPQTNSGVTGNSNSSGNNQKNSPDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKD
KYTLPGGLLAPGGNAMGAGVGVGGGLGGGVNQRMDSYAHMNGWTNGGYGMMQEQLGYGQH
PGLNAHNTAQMQQMHRYDMSALQYNSMTNSQTYMNGSPTYSMSYSQQSTPGMTLGSMGSV
VKSESSCSPPIVTSSSHSRGAPCQTGDLRDMISMYLPGAEVPEQTAQSRLHMSQHYQSAP
VPGTTINGTLPLSHM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaactgaactgaaaccaaccgcaccccagacaaattctggggtt
acggggaattcaaattcatctggaaacaaccagaaaaacagtccggaccgagtcaagaga
cccatgaatgccttcatggtttggtcgaggggacaacgaagaaagatggcacaggaaaac
cccaaaatgcacaattcggaaataagcaaaagacttggggccgagtggaagcttctatcc
gagagcgaaaagcgacctttcattgacgaagcgaagcgtctccgggctctccacatgaag
gaacatccggattacaaatacagaccccggaggaaaaccaagacgctgatgaagaaggac
aagtatactctgccaggtgggcttcttgcgccgggcggcaatgccatgggcgctggagtg
ggtgtagggggaggcttgggtggtggggttaatcaaaggatggacagttacgcacatatg
aacggctggaccaatggaggttatggcatgatgcaggagcagcttggttacggccagcac
cctggtttaaacgctcacaacaccgcgcagatgcagcaaatgcaccgctatgacatgagc
gcacttcagtacaactccatgacaaactcccagacctacatgaacggatcacccacgtat
agcatgtcatactcacagcagagcactcctggaatgactctgggctccatgggttcggtg
gtcaagtcagagtccagttgcagtccccccatagtcacgtcgtcgtctcactccaggggt
gctccgtgtcagactggagacctacgggacatgatcagtatgtacttaccgggtgctgag
gtgccggagcaaactgcccaaagcagactccatatgtcccaacattaccagagcgcacct
gtaccaggcacgacgattaatggcacactcccattatcacatatgtaa
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