Salmo salar (Atlantic salmon): 106584472
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Entry
106584472 CDS
T04363
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
106584472
Enzymes [BR:
sasa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
106584472
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106584472
Prokaryotic type
106584472
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
106584472
NCBI-ProteinID:
XP_014025314
UniProt:
A0A1S3PCX6
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Position
ssa23:complement(33916551..33931927)
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AA seq
650 aa
AA seq
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MADAEPMLVPAPGGEKRACPALEGEVAHSTKRPRVQKDENNGGGHSHKPAQDEAEEPEGK
ETEPLEEEDGEGAGLGSGEAFAEMMKHGLTELDVGILKFVSEHKGFSGILKERYSDFVVH
EVNKEGKTVRLDDLSVPEEAEEASVAEQPGSEVFTEEQKHELEQLQLFKNKEGNVSIEVA
DDTKEKRTLVHKAVKTLYPGLETKTEEREGKKFIVAYHAAGQKALAEVKIAAAPRKHSWP
KSRGAFCHFVLYKENKDTMEAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKVTAE
RLSHLNKCLNNFKLGNFCYKKHPLKLGELQGNHFTVVIRNITGTDDQVQQAMTSLRETGF
INYYGMQRFGTTAVPTHQVGKAILQDNWNEVIDLILKPRPGAEKGYMVKCREEWAQSQDP
EAALKKLPVKRCVEGQLLRGLSMYGKKNIITAFAMIPRNNRLMYIHSYQSFMWNTMVSRR
IEAFGLKAVEGDLVLRGGTASVLSAAEAETHSIQDVVMPLPGFDVIYPTHHVGKGYREKL
SADNLDIDNMRHRVRDYSLAGAYRRILIKPSDVSWEVINYDDPRISLVHTDVEKLEDQPP
PVFNKEGKYRALRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagagcccatgctggtccctgcccctgggggggagaaaagggcctgccct
gccttggagggtgaggtggcccacagcaccaagagacccagagtccaaaaggatgagaac
aacggaggaggacattctcacaagccagcccaggatgaggcagaagagccagaggggaag
gagacagagccattggaagaggaggatggagaaggggccgggttaggttctggagaggct
tttgcagagatgatgaagcatgggctcacagagctggatgtggggattcttaaatttgtc
agtgaacacaagggcttctctgggattctcaaggagaggtactctgattttgtggtacat
gaggtcaacaaagaaggcaagacagtgcggttggatgatctctcggttcctgaggaggct
gaggaagccagtgtggcagagcagccagggtctgaggttttcacagaggagcagaaacac
gaacttgagcagctgcagctcttcaagaacaaagagggcaatgtgtccatagaggtggcg
gatgacaccaaagagaaacggaccctggtgcacaaagccgtcaagaccctgtaccctgga
ctggagaccaagacagaggagcgggagggaaagaagttcatcgtggcctaccacgcagct
gggcagaaagcactcgcagaggtcaaaatcgctgcagcccccaggaaacactcctggcct
aagagccgtggggccttctgccactttgtcctttacaaagagaacaaggacaccatggag
gccatcaacgtgctgtccaagttcctcaggatgaggcctaatgtgttctcctacatgggg
accaaggacaagagagccatcactgtgcaggagattgcagttctcaaggtcacagcagaa
agactgtctcacctcaacaagtgcctcaataacttcaagctgggaaacttctgctacaag
aaacaccctctgaagctgggggaactacagggaaatcatttcactgtggtcatcaggaac
atcaccgggacagatgaccaggtccagcaggccatgacctccctcagagagacaggcttt
atcaactactacggcatgcagcgctttggcaccaccgccgtgcccacacaccaggttggc
aaggccatcctgcaagacaactggaatgaagtgatagatctgatcctgaagcctcgccct
ggagcggagaaaggttacatggtgaagtgtcgtgaggagtgggcccagtcccaggaccca
gaggcagcgcttaagaagctacctgtgaaacgctgtgtggagggacagctgctccgaggc
ctctccatgtacggcaagaagaacatcatcactgcattcgccatgatccctcgtaacaac
cggctgatgtacatccacagctaccagagctttatgtggaacaccatggtcagcagacgc
attgaggccttcgggctgaaggctgtggagggagacctcgtgctcagaggaggcactgcg
tccgtgctgtctgcagccgaggcggagacccactctattcaggacgtggtgatgccccta
ccagggtttgatgtcatctaccccactcaccacgtggggaagggctacagggagaagctg
agtgcagataacctggacattgacaacatgagacacagggtgagggactactctctggcc
ggggcctaccgacgcatcctcatcaaacccagtgacgtcagctgggaggtgattaactat
gatgaccctcggatctctctggttcacactgatgtggagaagctagaggaccaacctcct
ccggtcttcaacaaagaggggaagtacagggctttgaggatggagttctctctgcctccc
tccacctacgccaccatggccatcagagaggtgctcaagatggacaccagcatcaagaac
cagacccagctcaacaccacctggctcaactaa
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