Salmo salar (Atlantic salmon): 106584505
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Entry
106584505 CDS
T04363
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106584505 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106584505 (cnot2)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106584505 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106584505 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
106584505
NCBI-ProteinID:
XP_014025365
UniProt:
A0A1S3PCP4
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Position
ssa23:35699441..35710509
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AA seq
554 aa
AA seq
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MFSATRKKFVEGVESDYPDENMYYSQPSMYPHRSDKDVSALSARSHIPTTAPFELEMLSS
PSPSSSGQLSQLGASLYGPQSALGFSIRGMGNNTPQLNRSLTQGTPLPSHITPTTGVPTM
SLHTPPSPSRGILPMNSRNMLNHSQVGQGIGMGSGRTNSMGSSGLGSPNRSPPSIICMPK
QQPARQPFTINSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSR
REGSANPTPLLNPLAGRAPYEASSLHLMTSSVGMVTKPSNEPTQDFSIHNEDFPALPGPN
YKDPTLSNDDSKTNLNSTGKSTSSADGPKFPGDKTSSAQNNSQKKGIQVLPDGRVTNIPG
GMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPC
RPQDIDFHVPSEYLTNIHIRDKLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRD
WRYHKEERVWITRAPGMEPTLKTNTYERGTYYFFDCLNWRKVAKVKEFHLEYEKLEERPH
VPSTFNYNPAQQAF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtgctacgagaaagaagtttgtagagggggtggaaagtgactaccctgatgag
aacatgtactacagccagccgtccatgtacccacatcggtcggacaaagacgtaagtgct
ctgtctgctcgatcgcacatccctactacagcaccctttgaacttgaaatgctctcgtct
ccctcaccgtcgtcatcaggtcaactgtcccagcttggggccagtttatatggcccacag
agtgcactaggcttctcgataaggggcatgggcaacaacacgcctcagttaaaccgcagc
ttaacacaaggcactccgctaccgagccatatcacccccaccactggggtacccaccatg
tccctccataccccaccctcgccaagcagggggatcctgccgatgaactcgaggaacatg
ctgaaccactcccaggtgggccagggcatcgggatgggcagcggcaggaccaacagcatg
ggcagctcagggctgggcagccccaaccgcagcccccccagcattatctgtatgcccaaa
cagcagcctgcacggcagcccttcaccatcaacagcatgtcgggatttgggatgaaccgg
aaccaggcgtttgggatgaacaactcgttatcaagcaacatcttcaatggcacagacggc
agtgaaaacgtgacggggctagacctgtctgacttccctgcgttagcagacaggagtcgg
agggaaggaagcgcaaacccaacgccactacttaacccactagctggaagggccccctat
gaagcctcttctcttcatctcatgacctcatcagttggcatggtgacgaagccatcgaac
gagccgacgcaggatttctccatccacaacgaggacttccctgcactgcctggtcccaac
tacaaggaccccacgttgagcaacgatgacagcaaaacaaacctaaactctactggcaag
agcacgtccagtgcagacggtcctaagttccccggagacaagacgagctcagcacagaac
aacagccagaagaaagggatccaggtgttacctgatgggcgggtgacgaacattcctggg
ggaatggtgacggaccagtttggaatgattggcttgctgacttttatccgagcagcggag
acggacccgggcatggtgcacttggcactggggagtgacctcacaacgcttggactcaac
ctcaactctccagaaaacctgtaccccaagtttgcttccccctgggcatcagcaccatgt
cgacctcaagacattgacttccacgtcccctctgagtacttaaccaacatccacataagg
gacaagctggcagctattaaactggcgcggtacggtgaagacctgctgttctatctgtac
tacatgaacggaggagacctgctacagctcctggcagcagtagagctctttaaccgggat
tggcggtaccacaaagaggagcgggtgtggatcacgcgggcgccgggcatggagcccaca
ctaaagaccaacacctatgagagggggacctactacttctttgattgtcttaactggagg
aaggtagccaaggtaaaggagttccacctggagtacgaaaagctagaagagaggccccac
gtcccatctaccttcaactacaacccagctcagcaggccttctga
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